LOCUS BC008208 1493 bp mRNA linear HUM 30-SEP-2003 DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, mRNA (cDNA clone IMAGE:3869206), partial cds. ACCESSION BC008208 VERSION BC008208.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1493) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1493) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: i Column: 15. FEATURES Location/Qualifiers source 1..1493 /db_xref="H-InvDB:HIT000087014" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3869206" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1493 /gene="DDX42" /gene_synonym="RHELP" /gene_synonym="RNAHP" /gene_synonym="SF3b125" /db_xref="GeneID:11325" CDS <1..628 /gene="DDX42" /gene_synonym="RHELP" /gene_synonym="RNAHP" /gene_synonym="SF3b125" /codon_start=2 /product="DDX42 protein" /protein_id="AAH08208.1" /db_xref="GeneID:11325" /translation="WTSAGSLNSVPTNSAQQGHNSPDSPVTSAAKGIPGFGNTGNISG APVTYPSAGAQGVNNTASGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSP RHGDGGRHGDGYRHPESSSRHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAF NRESKMEPKMEPKVDSSKMDKVDSKTDKTADGFAVPEPPKRKKSRWDS" BASE COUNT 429 a 291 c 408 g 365 t ORIGIN 1 gtggactagt gcagggagct tgaattctgt tccaactaac tcagcacaac agggccataa 61 cagtcctgac agccccgtca ccagtgccgc caagggcatc ccaggctttg gcaatactgg 121 caacatcagt ggtgcccctg tgacctaccc gtctgccgga gcccaaggag tcaacaacac 181 agcttcaggg aataacagcc gagaagggac tgggggcagc aacgggaaaa gagagagata 241 tactgagaac cggggcagca gccgtcacag tcacggagag actggcaatc ggcatagcga 301 tagtccacgt cacggagatg gtggtcgcca tggagatgga taccgccatc cagaaagcag 361 cagccgtcat actgatggcc atcggcacgg ggagaacaga catggaggaa gcgcaggccg 421 gcatggggag aaccggggtg caaatgatgg tcggaatggg gaaagcagga aagaagcttt 481 taatcgtgag agcaagatgg agcccaagat ggaacccaaa gtggacagca gcaagatgga 541 caaggtggac agcaagacag ataagacagc tgacggcttt gctgtcccag agccgcctaa 601 acgcaagaaa agtcgatggg acagttagag gggatgtgct aaagcgtgaa atcagttgtc 661 cttaattttt agaaagattt tggtaactag gtgtctcagg gctgggttgg ggtccaaagt 721 gtaaggaccc cctgccctta gtggagagct ggagcttgga gacattaccc cttcatcaga 781 aggaattttc ggatgttttc ttgggaagct gttttggtcc ttggaagcag tgagagctgg 841 gaagcttctt ttggctctag gtgagttgtc atgcgggtaa gttgaggtta tcttgggata 901 aagggtcttc tagggcacaa aactcactct aggtttatat tgtatgtagc ttatattttt 961 tactaaggtg tcaccttata agcatctata aattgagttc tttttcttag ttgtatggcc 1021 aggcagtccc cattttagga gttggcttct gcaaattcaa tccattgagc taactgttgg 1081 ggagcaattt ggtagttgta gacatttgca gggaagggag atgtctgatt ctaaatggga 1141 gttgatgctc aggtccccag ccaggtttgc atccagccct gagacatgta ggaaacacct 1201 ttcagaccca ggctctgaag attcccagaa gccacaagga ttgaagggaa aaggtgatcc 1261 tggtaactgt tccaggattg ctccaggttt gagatggtat tgctaaattt aaaattaaac 1321 aagagaccca acaacagctt ttaaagtgtc ttctatttca ttgtattttt tttaacttgc 1381 cccaatgata gaaaagtctt ttgctgaaat gattttgatg atttttgttt atcgtttata 1441 aaaaggaaaa gaaatataca aactttgact tttgtgaaaa aaaaaaaaaa aaa //