LOCUS BC008149 1482 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens hydroxymethylbilane synthase, mRNA (cDNA clone MGC:17205 IMAGE:4178944), complete cds. ACCESSION BC008149 VERSION BC008149.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1482) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1482) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: i Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 66933007. FEATURES Location/Qualifiers source 1..1482 /db_xref="H-InvDB:HIT000033656" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17205 IMAGE:4178944" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1482 /gene="HMBS" /gene_synonym="PBG-D" /db_xref="GeneID:3145" /db_xref="HGNC:HGNC:4982" /db_xref="MIM:609806" CDS 113..1198 /gene="HMBS" /gene_synonym="PBG-D" /codon_start=1 /product="hydroxymethylbilane synthase" /protein_id="AAH08149.1" /db_xref="GeneID:3145" /db_xref="HGNC:HGNC:4982" /db_xref="MIM:609806" /translation="MSGNGNAAATAEENSPKMRVIRVGTRKSQLARIQTDSVVATLKA SYPGLQFEIIAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPT VLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPH LEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQG ALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLEGGCSVPVAVHTAMKDGQL YLTGGVWSLDGSDSIQETMQATIHVPAQHEDGPEDDPQLVGITARNIPRGPQLAAQNL GISLANLLLSKGAKNILDVARQLNDAH" BASE COUNT 354 a 402 c 423 g 303 t ORIGIN 1 ggacgacctc gggtcccacg tgtccccggt actcgccggc cggagcctcc ggcttcccgg 61 ggccggggga ccttagcggc acccacacac agcctacttt ccaagcggag ccatgtctgg 121 taacggcaat gcggctgcaa cggcggaaga aaacagccca aagatgagag tgattcgcgt 181 gggtacccgc aagagccagc ttgctcgcat acagacggac agtgtggtgg caacattgaa 241 agcctcgtac cctggcctgc agtttgaaat cattgctatg tccaccacag gggacaagat 301 tcttgatact gcactctcta agattggaga gaaaagcctg tttaccaagg agcttgaaca 361 tgccctggag aagaatgaag tggacctggt tgttcactcc ttgaaggacc tgcccactgt 421 gcttcctcct ggcttcacca tcggagccat ctgcaagcgg gaaaaccctc atgatgctgt 481 tgtctttcac ccaaaatttg ttgggaagac cctagaaacc ctgccagaga agagtgtggt 541 gggaaccagc tccctgcgaa gagcagccca gctgcagaga aagttcccgc atctggagtt 601 caggagtatt cggggaaacc tcaacacccg gcttcggaag ctggacgagc agcaggagtt 661 cagtgccatc atcctggcaa cagctggcct gcagcgcatg ggctggcaca accgggtggg 721 gcagatcctg caccctgagg aatgcatgta tgctgtgggc cagggggcct tgggcgtgga 781 agtgcgagcc aaggaccagg acatcttgga tctggtgggt gtgctgcacg atcccgagac 841 tctgcttcgc tgcatcgctg aaagggcctt cctgaggcac ctggaaggag gctgcagtgt 901 gccagtagcc gtgcatacag ctatgaagga tgggcaactg tacctgactg gaggagtctg 961 gagtctagac ggctcagata gcatacaaga gaccatgcag gctaccatcc atgtccctgc 1021 ccagcatgaa gatggccctg aggatgaccc acagttggta ggcatcactg ctcgtaacat 1081 tccacgaggg ccccagttgg ctgcccagaa cttgggcatc agcctggcca acttgttgct 1141 gagcaaagga gccaaaaaca tcctggatgt tgcacggcag cttaacgatg cccattaact 1201 ggtttgtggg gcacagatgc ctgggttgct gctgtccagt gcctacatcc cgggcctcag 1261 tgccccattc tcactgctat ctggggagtg attaccccgg gagactgaac tgcagggttc 1321 aagccttcca gggatttgcc tcaccttggg gccttgatga ctgccttgcc tcctcagtat 1381 gtgggggctt catctcttta gagaagtcca agcaacagcc tttgaatgta accaatccta 1441 ctaataaacc agttctgaag gtaaaaaaaa aaaaaaaaaa aa //