LOCUS BC008141 1378 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens UCHL5 interacting protein, mRNA (cDNA clone MGC:17009 IMAGE:4154976), complete cds. ACCESSION BC008141 VERSION BC008141.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1378) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1378) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: d Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1378 /db_xref="H-InvDB:HIT000033653" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17009 IMAGE:4154976" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1378 /gene="UCHL5IP" /gene_synonym="HSXQ28ORF" /gene_synonym="UIP1" /db_xref="GeneID:55559" /db_xref="HGNC:HGNC:32979" /db_xref="MIM:300540" CDS 45..1151 /gene="UCHL5IP" /gene_synonym="HSXQ28ORF" /gene_synonym="UIP1" /codon_start=1 /product="UCHL5 interacting protein" /protein_id="AAH08141.3" /db_xref="GeneID:55559" /db_xref="HGNC:HGNC:32979" /db_xref="MIM:300540" /translation="MGGARLGARNMAGQDAGCGRGGDDYSEDEGDSSVSRAAVEVFGK LKDLNCPFLEGLYITEPKTIQELLCSPSEYRLEILEWMCTRVWPSLQDRFSSLKGVPT EVKIQEMTKLGHELMLCAPDDQELLKGCACAQKQLHFMDQLLDTIRSLTIGCSSCSSL MEHFEDTREKNEALLGELFSSPHLQMLLNPECDPWPLDMQPLLNKQSDDWQWASASAK SEEEEKLAELARQLQESAAKLHALRTEYFAQHEQGAAAGAADISTLDQKLRLVTSDFH QLILAFLQVYDDELGECCQRPGPDLHPCGPIIQATHQNLTSYSQLLQVVMAVADTSAK AVETVKKQQGEQICWGGSSSVMSLATKMNELMEK" BASE COUNT 318 a 378 c 441 g 241 t ORIGIN 1 gctggaggtt gattggcggt cttgccggcc agtgaagcca gggcatgggc ggggcgcggc 61 tcggagcgcg aaacatggcg gggcaggacg ctggctgcgg ccgtggcggc gacgactact 121 cagaggacga gggcgacagc agcgtgtcca gggcggctgt ggaggtgttc gggaagctga 181 aggacctaaa ctgccccttc ctcgagggtc tgtatatcac agagccaaag acaattcagg 241 aactgctgtg cagcccctca gagtaccgct tggagatcct agagtggatg tgtacccggg 301 tctggccctc actgcaggac aggttcagct cactgaaagg ggtcccaaca gaggtgaaga 361 tccaagaaat gacgaagctg ggccacgagc tgatgctgtg tgcgccagat gaccaggagc 421 tcctcaaggg ctgtgcctgc gcccagaagc agctacactt catggaccag ttgctcgata 481 ccatccggag cctgaccatt gggtgctcca gttgctcgag cctgatggag cacttcgagg 541 acaccaggga gaagaacgag gccttgctgg gggagctctt ctctagcccc cacctgcaga 601 tgctcctgaa tccagagtgc gacccgtggc ccctggacat gcagcccctc ctcaacaagc 661 agagtgatga ctggcagtgg gccagtgcct ctgccaagtc cgaggaggag gagaagctgg 721 cggagcttgc caggcagctg caggagagtg ctgccaagtt gcacgcgctt agaacggagt 781 actttgcaca gcatgagcaa ggggctgctg cgggcgcagc cgacatcagc accctagacc 841 agaagctgcg tctggtcact tccgacttcc accagctaat cttggctttt ctccaagtct 901 acgacgacga gctgggcgag tgctgccagc gcccaggccc tgacctccac ccgtgcggcc 961 ccatcatcca ggccacgcac cagaatctga cttcctacag ccaactgctg caagtggtca 1021 tggcagttgc tgacacctct gcgaaggccg tggagaccgt gaagaagcag caaggcgagc 1081 agatctgctg gggtggcagc agctccgtca tgagtctagc taccaagatg aatgaactaa 1141 tggagaaata gaaagtcttc agtgatggcc tacgccaaag cacaggatgg ggcgggcagg 1201 aagccctctc ccaagatcga gttggccgag gatggatgat tgtggcagca gaagccgttg 1261 cagccccacg ttgtgctcta ggcagggacc tttggcccct ttggggaggg agagacagac 1321 gggcggtttg acttggacac aaagaaagcc ttggtttcta agcaaaaaaa aaaaaaaa //