LOCUS BC008141 1378 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens UCHL5 interacting protein, mRNA (cDNA clone MGC:17009
IMAGE:4154976), complete cds.
ACCESSION BC008141
VERSION BC008141.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1378)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1378)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1378
/db_xref="H-InvDB:HIT000033653"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17009 IMAGE:4154976"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1378
/gene="UCHL5IP"
/gene_synonym="HSXQ28ORF"
/gene_synonym="UIP1"
/db_xref="GeneID:55559"
/db_xref="HGNC:HGNC:32979"
/db_xref="MIM:300540"
CDS 45..1151
/gene="UCHL5IP"
/gene_synonym="HSXQ28ORF"
/gene_synonym="UIP1"
/codon_start=1
/product="UCHL5 interacting protein"
/protein_id="AAH08141.3"
/db_xref="GeneID:55559"
/db_xref="HGNC:HGNC:32979"
/db_xref="MIM:300540"
/translation="MGGARLGARNMAGQDAGCGRGGDDYSEDEGDSSVSRAAVEVFGK
LKDLNCPFLEGLYITEPKTIQELLCSPSEYRLEILEWMCTRVWPSLQDRFSSLKGVPT
EVKIQEMTKLGHELMLCAPDDQELLKGCACAQKQLHFMDQLLDTIRSLTIGCSSCSSL
MEHFEDTREKNEALLGELFSSPHLQMLLNPECDPWPLDMQPLLNKQSDDWQWASASAK
SEEEEKLAELARQLQESAAKLHALRTEYFAQHEQGAAAGAADISTLDQKLRLVTSDFH
QLILAFLQVYDDELGECCQRPGPDLHPCGPIIQATHQNLTSYSQLLQVVMAVADTSAK
AVETVKKQQGEQICWGGSSSVMSLATKMNELMEK"
BASE COUNT 318 a 378 c 441 g 241 t
ORIGIN
1 gctggaggtt gattggcggt cttgccggcc agtgaagcca gggcatgggc ggggcgcggc
61 tcggagcgcg aaacatggcg gggcaggacg ctggctgcgg ccgtggcggc gacgactact
121 cagaggacga gggcgacagc agcgtgtcca gggcggctgt ggaggtgttc gggaagctga
181 aggacctaaa ctgccccttc ctcgagggtc tgtatatcac agagccaaag acaattcagg
241 aactgctgtg cagcccctca gagtaccgct tggagatcct agagtggatg tgtacccggg
301 tctggccctc actgcaggac aggttcagct cactgaaagg ggtcccaaca gaggtgaaga
361 tccaagaaat gacgaagctg ggccacgagc tgatgctgtg tgcgccagat gaccaggagc
421 tcctcaaggg ctgtgcctgc gcccagaagc agctacactt catggaccag ttgctcgata
481 ccatccggag cctgaccatt gggtgctcca gttgctcgag cctgatggag cacttcgagg
541 acaccaggga gaagaacgag gccttgctgg gggagctctt ctctagcccc cacctgcaga
601 tgctcctgaa tccagagtgc gacccgtggc ccctggacat gcagcccctc ctcaacaagc
661 agagtgatga ctggcagtgg gccagtgcct ctgccaagtc cgaggaggag gagaagctgg
721 cggagcttgc caggcagctg caggagagtg ctgccaagtt gcacgcgctt agaacggagt
781 actttgcaca gcatgagcaa ggggctgctg cgggcgcagc cgacatcagc accctagacc
841 agaagctgcg tctggtcact tccgacttcc accagctaat cttggctttt ctccaagtct
901 acgacgacga gctgggcgag tgctgccagc gcccaggccc tgacctccac ccgtgcggcc
961 ccatcatcca ggccacgcac cagaatctga cttcctacag ccaactgctg caagtggtca
1021 tggcagttgc tgacacctct gcgaaggccg tggagaccgt gaagaagcag caaggcgagc
1081 agatctgctg gggtggcagc agctccgtca tgagtctagc taccaagatg aatgaactaa
1141 tggagaaata gaaagtcttc agtgatggcc tacgccaaag cacaggatgg ggcgggcagg
1201 aagccctctc ccaagatcga gttggccgag gatggatgat tgtggcagca gaagccgttg
1261 cagccccacg ttgtgctcta ggcagggacc tttggcccct ttggggaggg agagacagac
1321 gggcggtttg acttggacac aaagaaagcc ttggtttcta agcaaaaaaa aaaaaaaa
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