LOCUS BC008070 1346 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae), mRNA (cDNA clone MGC:2805 IMAGE:2961422), complete cds. ACCESSION BC008070 VERSION BC008070.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1346) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1346) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC008070.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 2 Row: n Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 46370096. FEATURES Location/Qualifiers source 1..1346 /db_xref="H-InvDB:HIT000033628" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2805 IMAGE:2961422" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1346 /gene="SSU72" /gene_synonym="FLJ13048" /gene_synonym="HSPC182" /gene_synonym="PNAS-120" /db_xref="GeneID:29101" /db_xref="HGNC:HGNC:25016" CDS 274..858 /gene="SSU72" /gene_synonym="FLJ13048" /gene_synonym="HSPC182" /gene_synonym="PNAS-120" /codon_start=1 /product="SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)" /protein_id="AAH08070.1" /db_xref="GeneID:29101" /db_xref="HGNC:HGNC:25016" /translation="MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKL PGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK DLFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQ CIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY" BASE COUNT 372 a 357 c 354 g 263 t ORIGIN 1 gtctctgctg cggacgccgg gggccggcgc ggcgttggcc gcccccggcc tcgccgagtg 61 cagcgcgccc gaaggccagt gcctgcgctc cgtccgcggc ccggcgccca gggtgggcgg 121 ggaggccgcc gcgcagtcgc cgcacgctac accgccggcg ccgtcgtttc gcgtcccgct 181 tccggccacc gcggccgcca ttttgttcgc gcggaagcgc cgcggtaggg tgggaaccca 241 agcgggagag ccgcgggatt tgcggccgcc gccatgccgt cgtccccgct gcgggtggcg 301 gtggtgtgct cgagcaacca gaaccggagc atggaggcgc acaacatcct cagcaaacgg 361 ggattcagcg tccgatcctt tggaacaggg actcacgtga agcttccagg accagctccc 421 gacaagccca atgtttatga tttcaaaacc acatatgacc agatgtacaa tgatcttctt 481 aggaaagaca aagaactcta tacacagaat gggattttac atatgctgga cagaaataag 541 agaatcaagc cccggccaga aagattccag aactgcaaag acctgtttga tctgatcctc 601 acttgcgaag agagagtgta tgaccaggtg gtggaagatc tgaattccag agaacaggag 661 acctgccagc ccgtgcacgt ggtcaatgtg gacatccagg acaaccacga ggaggccacc 721 ctgggggcgt ttctcatctg tgagctctgc cagtgtatcc agcacacgga agacatggag 781 aacgagatcg acgagctgct gcaggagttc gaggagaaga gtggccgcac ctttctgcac 841 accgtctgct tctactgagc ccagcgcccg catggagccg cctctggagc ttcctgttgt 901 tcatactttt tccttcctga catttgtttt tacttacagg tgttctgctg gtgacggtag 961 cattacccaa ataaactgtg catatgaaat gggagaggag atgccaaaac gccagatgaa 1021 agcaatcaag tttcttcttt tccactttta cttatgagcg ggatattgat tacaaagttt 1081 ttcttcttta accaaaaagg aaagacaacg gtttgtgtgc acttcccgac atacctgtgt 1141 cttcgtgtgc ctgccttccc tccctcctcc ccaccgggcc ggactgtaca gagccctgct 1201 gcggcgtgtt aggaatgacc tggaattgtc aataaacaga tgctgctgtc aaaaaaaaaa 1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1321 aaaaaaaaaa aaaaaaaaaa aaaaaa //