LOCUS BC008070 1346 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SSU72 RNA polymerase II CTD phosphatase homolog (S.
cerevisiae), mRNA (cDNA clone MGC:2805 IMAGE:2961422), complete
cds.
ACCESSION BC008070
VERSION BC008070.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1346)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1346)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008070.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: n Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46370096.
FEATURES Location/Qualifiers
source 1..1346
/db_xref="H-InvDB:HIT000033628"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2805 IMAGE:2961422"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1346
/gene="SSU72"
/gene_synonym="FLJ13048"
/gene_synonym="HSPC182"
/gene_synonym="PNAS-120"
/db_xref="GeneID:29101"
/db_xref="HGNC:HGNC:25016"
CDS 274..858
/gene="SSU72"
/gene_synonym="FLJ13048"
/gene_synonym="HSPC182"
/gene_synonym="PNAS-120"
/codon_start=1
/product="SSU72 RNA polymerase II CTD phosphatase homolog
(S. cerevisiae)"
/protein_id="AAH08070.1"
/db_xref="GeneID:29101"
/db_xref="HGNC:HGNC:25016"
/translation="MPSSPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKL
PGPAPDKPNVYDFKTTYDQMYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCK
DLFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQDNHEEATLGAFLICELCQ
CIQHTEDMENEIDELLQEFEEKSGRTFLHTVCFY"
BASE COUNT 372 a 357 c 354 g 263 t
ORIGIN
1 gtctctgctg cggacgccgg gggccggcgc ggcgttggcc gcccccggcc tcgccgagtg
61 cagcgcgccc gaaggccagt gcctgcgctc cgtccgcggc ccggcgccca gggtgggcgg
121 ggaggccgcc gcgcagtcgc cgcacgctac accgccggcg ccgtcgtttc gcgtcccgct
181 tccggccacc gcggccgcca ttttgttcgc gcggaagcgc cgcggtaggg tgggaaccca
241 agcgggagag ccgcgggatt tgcggccgcc gccatgccgt cgtccccgct gcgggtggcg
301 gtggtgtgct cgagcaacca gaaccggagc atggaggcgc acaacatcct cagcaaacgg
361 ggattcagcg tccgatcctt tggaacaggg actcacgtga agcttccagg accagctccc
421 gacaagccca atgtttatga tttcaaaacc acatatgacc agatgtacaa tgatcttctt
481 aggaaagaca aagaactcta tacacagaat gggattttac atatgctgga cagaaataag
541 agaatcaagc cccggccaga aagattccag aactgcaaag acctgtttga tctgatcctc
601 acttgcgaag agagagtgta tgaccaggtg gtggaagatc tgaattccag agaacaggag
661 acctgccagc ccgtgcacgt ggtcaatgtg gacatccagg acaaccacga ggaggccacc
721 ctgggggcgt ttctcatctg tgagctctgc cagtgtatcc agcacacgga agacatggag
781 aacgagatcg acgagctgct gcaggagttc gaggagaaga gtggccgcac ctttctgcac
841 accgtctgct tctactgagc ccagcgcccg catggagccg cctctggagc ttcctgttgt
901 tcatactttt tccttcctga catttgtttt tacttacagg tgttctgctg gtgacggtag
961 cattacccaa ataaactgtg catatgaaat gggagaggag atgccaaaac gccagatgaa
1021 agcaatcaag tttcttcttt tccactttta cttatgagcg ggatattgat tacaaagttt
1081 ttcttcttta accaaaaagg aaagacaacg gtttgtgtgc acttcccgac atacctgtgt
1141 cttcgtgtgc ctgccttccc tccctcctcc ccaccgggcc ggactgtaca gagccctgct
1201 gcggcgtgtt aggaatgacc tggaattgtc aataaacaga tgctgctgtc aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaa
//