LOCUS BC007596 1631 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens WD repeat domain, phosphoinositide interacting 2, mRNA (cDNA clone MGC:15650 IMAGE:3346710), complete cds. ACCESSION BC007596 VERSION BC007596.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1631) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1631) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: l Column: 9. FEATURES Location/Qualifiers source 1..1631 /db_xref="H-InvDB:HIT000033321" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15650 IMAGE:3346710" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1631 /gene="WIPI2" /gene_synonym="Atg21" /gene_synonym="CGI-50" /gene_synonym="DKFZP434J154" /gene_synonym="WIPI-2" /db_xref="GeneID:26100" /db_xref="HGNC:HGNC:32225" /db_xref="MIM:609225" CDS 184..1494 /gene="WIPI2" /gene_synonym="Atg21" /gene_synonym="CGI-50" /gene_synonym="DKFZP434J154" /gene_synonym="WIPI-2" /codon_start=1 /product="WD repeat domain, phosphoinositide interacting 2" /protein_id="AAH07596.1" /db_xref="GeneID:26100" /db_xref="HGNC:HGNC:32225" /db_xref="MIM:609225" /translation="MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVD KLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTIL AVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGS ATIGEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQ KLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGY FGKVLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADG YLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAAAGKGTYV PSSPTRLAYTDDLGAVGGACLEDEASALRLDEDSEHPPMILRTD" BASE COUNT 389 a 465 c 466 g 311 t ORIGIN 1 cgggtgcccc ggctctggag cataaacaag agcggggacg ggatgaggcg gcggttgatc 61 ccagggtggc gagtggcggc gaccgaggcg gcgagcgggg cccggcgccg accctgagtg 121 cagcctgacc cgccctcgcg cgcgcgccct ccccggccgg gcccactcgc cgcgcgccca 181 gccatgaacc tggcgagcca gagcggggag gccggcgccg gccagctgct cttcgccaac 241 ttcaaccagg acaacacgtc cctagctgtt ggtagtaagt ccggttataa atttttctcc 301 ctttcttctg tggataagct ggaacagatc tatgaatgca ccgatacgga agatgtgtgc 361 attgtagaga gattgttctc cagcagccta gtggccatcg tgagccttaa agcaccaagg 421 aagctaaagg tttgccactt taagaaggga actgagatct gcaactacag ctactccaac 481 acgattctgg ctgtgaagct caacaggcag aggctgatag tatgcctgga ggagtccctg 541 tacatccaca acattcggga catgaaggtg ctgcatacga tcagggagac gcctccaaac 601 cctgcaggcc tgtgtgcgct gtcaatcaac aacgacaact gctacttggc gtacccaggg 661 agcgcgacca tcggagaggt gcaggtcttc gataccatta atttgagagc tgcaaacatg 721 attccggctc acgacagtcc tttagcggca ctggcctttg acgcaagtgg aactaaactt 781 gccacggctt cggagaaggg gaccgtgatt agggtatttt ccattccaga aggacaaaaa 841 ctctttgagt ttcggagagg agtaaagagg tgcgtgagca tctgctccct ggccttcagc 901 atggacggca tgttcctctc cgcctccagc aacactgaga ccgtgcacat cttcaaactc 961 gagactgtga aagaaaaacc cccagaggag cccaccacct ggaccgggta cttcgggaaa 1021 gtgctcatgg cctccaccag ctacctgcct tcccaagtga cagaaatgtt caaccagggc 1081 agagccttcg ccacggtccg cctgccattc tgcggccaca aaaacatctg ctcgctagcc 1141 acaattcaga agatcccgcg gttgttggtg ggtgccgccg acgggtacct gtacatgtac 1201 aacctggacc cccaggaggg cggcgagtgt gccctgatga agcagcaccg gctggacggc 1261 agtctggaaa cgaccaatga gatcttggac tctgcctctc acgactgccc cttagtcact 1321 cagacatacg gcgcagctgc aggaaaaggt acttacgtgc cttcatcccc aacgagactt 1381 gcctacacag acgacctggg tgctgtgggt ggcgcctgcc tggaggacga ggccagcgcc 1441 ctgcgcctgg atgaggacag cgagcacccg cccatgattc ttcggactga ctgaacttga 1501 cctgtgacct ctgacccggg gagcagagaa cactggcttc acagaggact ttgtgcattg 1561 ctgctatgaa ctttgacctg agtcggggga gaggatggca gagactttat taaaaaaaaa 1621 aaaaaaaaaa a //