LOCUS BC007596 1631 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens WD repeat domain, phosphoinositide interacting 2, mRNA
(cDNA clone MGC:15650 IMAGE:3346710), complete cds.
ACCESSION BC007596
VERSION BC007596.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1631)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1631)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: l Column: 9.
FEATURES Location/Qualifiers
source 1..1631
/db_xref="H-InvDB:HIT000033321"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15650 IMAGE:3346710"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1631
/gene="WIPI2"
/gene_synonym="Atg21"
/gene_synonym="CGI-50"
/gene_synonym="DKFZP434J154"
/gene_synonym="WIPI-2"
/db_xref="GeneID:26100"
/db_xref="HGNC:HGNC:32225"
/db_xref="MIM:609225"
CDS 184..1494
/gene="WIPI2"
/gene_synonym="Atg21"
/gene_synonym="CGI-50"
/gene_synonym="DKFZP434J154"
/gene_synonym="WIPI-2"
/codon_start=1
/product="WD repeat domain, phosphoinositide interacting
2"
/protein_id="AAH07596.1"
/db_xref="GeneID:26100"
/db_xref="HGNC:HGNC:32225"
/db_xref="MIM:609225"
/translation="MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVD
KLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTIL
AVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGS
ATIGEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQ
KLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLETVKEKPPEEPTTWTGY
FGKVLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLATIQKIPRLLVGAADG
YLYMYNLDPQEGGECALMKQHRLDGSLETTNEILDSASHDCPLVTQTYGAAAGKGTYV
PSSPTRLAYTDDLGAVGGACLEDEASALRLDEDSEHPPMILRTD"
BASE COUNT 389 a 465 c 466 g 311 t
ORIGIN
1 cgggtgcccc ggctctggag cataaacaag agcggggacg ggatgaggcg gcggttgatc
61 ccagggtggc gagtggcggc gaccgaggcg gcgagcgggg cccggcgccg accctgagtg
121 cagcctgacc cgccctcgcg cgcgcgccct ccccggccgg gcccactcgc cgcgcgccca
181 gccatgaacc tggcgagcca gagcggggag gccggcgccg gccagctgct cttcgccaac
241 ttcaaccagg acaacacgtc cctagctgtt ggtagtaagt ccggttataa atttttctcc
301 ctttcttctg tggataagct ggaacagatc tatgaatgca ccgatacgga agatgtgtgc
361 attgtagaga gattgttctc cagcagccta gtggccatcg tgagccttaa agcaccaagg
421 aagctaaagg tttgccactt taagaaggga actgagatct gcaactacag ctactccaac
481 acgattctgg ctgtgaagct caacaggcag aggctgatag tatgcctgga ggagtccctg
541 tacatccaca acattcggga catgaaggtg ctgcatacga tcagggagac gcctccaaac
601 cctgcaggcc tgtgtgcgct gtcaatcaac aacgacaact gctacttggc gtacccaggg
661 agcgcgacca tcggagaggt gcaggtcttc gataccatta atttgagagc tgcaaacatg
721 attccggctc acgacagtcc tttagcggca ctggcctttg acgcaagtgg aactaaactt
781 gccacggctt cggagaaggg gaccgtgatt agggtatttt ccattccaga aggacaaaaa
841 ctctttgagt ttcggagagg agtaaagagg tgcgtgagca tctgctccct ggccttcagc
901 atggacggca tgttcctctc cgcctccagc aacactgaga ccgtgcacat cttcaaactc
961 gagactgtga aagaaaaacc cccagaggag cccaccacct ggaccgggta cttcgggaaa
1021 gtgctcatgg cctccaccag ctacctgcct tcccaagtga cagaaatgtt caaccagggc
1081 agagccttcg ccacggtccg cctgccattc tgcggccaca aaaacatctg ctcgctagcc
1141 acaattcaga agatcccgcg gttgttggtg ggtgccgccg acgggtacct gtacatgtac
1201 aacctggacc cccaggaggg cggcgagtgt gccctgatga agcagcaccg gctggacggc
1261 agtctggaaa cgaccaatga gatcttggac tctgcctctc acgactgccc cttagtcact
1321 cagacatacg gcgcagctgc aggaaaaggt acttacgtgc cttcatcccc aacgagactt
1381 gcctacacag acgacctggg tgctgtgggt ggcgcctgcc tggaggacga ggccagcgcc
1441 ctgcgcctgg atgaggacag cgagcacccg cccatgattc ttcggactga ctgaacttga
1501 cctgtgacct ctgacccggg gagcagagaa cactggcttc acagaggact ttgtgcattg
1561 ctgctatgaa ctttgacctg agtcggggga gaggatggca gagactttat taaaaaaaaa
1621 aaaaaaaaaa a
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