LOCUS BC007580 2625 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens jub, ajuba homolog (Xenopus laevis), mRNA (cDNA clone MGC:15563 IMAGE:3139903), complete cds. ACCESSION BC007580 VERSION BC007580.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2625) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2625) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 22 Row: h Column: 16. FEATURES Location/Qualifiers source 1..2625 /db_xref="H-InvDB:HIT000033312" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15563 IMAGE:3139903" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2625 /gene="JUB" /gene_synonym="MGC15563" /db_xref="GeneID:84962" CDS 73..1689 /gene="JUB" /gene_synonym="MGC15563" /codon_start=1 /product="JUB protein" /protein_id="AAH07580.1" /db_xref="GeneID:84962" /translation="MERLGEKASRLLEKFGRRKGESSRSGSDGTPGPGKGRLSGLGGP RKSGPRGATGGPGDEPLEPAREQGSLDAERNQRGSFEAPRYEGSFPAGPPPTRALPLP QSLPPDFRLEPTAPALSPRSSFASSSASDASKPSSPRGSLLLDGAGAGGAGGSRPCSN RTSGISMGYDQRHGSPLPAGPCLFGPPLAGAPAGYSPGGVPSAYPELHAALDRLYAQR PAGFGCQESRHSYPPALGSPGALAGAGVGAAGPLERRGAQPGRHSVTGYGDCAVGARY QDELTALLRLTVGTGGREAGARGEPSGIEPSGLEEPPGPFVPEAARARMREPEAREDY FGTCIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYL FSGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVY CVTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEG CCCFPLDGHLLCHGCHMQRLNARQPPANYI" misc_feature 1084..1242 /gene="JUB" /gene_synonym="MGC15563" /note="LIM; Region: Zinc-binding domain present in Lin-11, Isl-1, Mec-3. Zinc-binding domain family. Some LIM domains bind protein partners via tyrosine-containing motifs. LIM domains are found in many key regulators of developmental pathways" /db_xref="CDD:smart00132" misc_feature 1276..1434 /gene="JUB" /gene_synonym="MGC15563" /note="LIM; Region: Zinc-binding domain present in Lin-11, Isl-1, Mec-3. Zinc-binding domain family. Some LIM domains bind protein partners via tyrosine-containing motifs. LIM domains are found in many key regulators of developmental pathways" /db_xref="CDD:smart00132" misc_feature 1456..1641 /gene="JUB" /gene_synonym="MGC15563" /note="LIM; Region: Zinc-binding domain present in Lin-11, Isl-1, Mec-3. Zinc-binding domain family. Some LIM domains bind protein partners via tyrosine-containing motifs. LIM domains are found in many key regulators of developmental pathways" /db_xref="CDD:smart00132" BASE COUNT 576 a 704 c 760 g 585 t ORIGIN 1 aaagagaacc ggccgccgag acgccgcagg gtgccaggcg gggagggggc gagaggcccc 61 aggcccgagg gcatggagcg gttaggagag aaagccagtc gcctgctgga gaagttcggc 121 cgcagaaagg gtgaatctag ccggtctggg tctgacggga cccccgggcc gggcaagggg 181 cgcctaagtg ggttgggggg acctaggaag tcagggcccc gaggagctac tgggggacct 241 ggggatgagc cgttggagcc ggcccgggag caaggttccc tggacgctga gcgaaatcag 301 cgcggctcct ttgaggcgcc gcgctacgaa ggctcttttc ccgcggggcc gccgcccacc 361 cgggccttgc ctctacctca gtcgttgccc cccgattttc ggctggagcc cacggccccg 421 gccctcagcc cccgctctag cttcgccagt agctcggcca gcgacgcgag caagccgtcc 481 agcccccggg gcagcctgct gctggacggg gcgggggctg gcggagctgg aggtagccgg 541 ccctgcagca atcgcaccag cggcatcagc atgggctacg accagcgcca cgggagcccc 601 ttgccagcgg ggccgtgcct gtttggccca cccctggccg gagcaccggc aggctattct 661 cccggagggg tcccgtccgc ctacccggag ctccacgccg ccctggaccg attgtacgct 721 cagcggcccg cggggttcgg ctgccaggaa agccgccact cgtatccccc ggccctgggc 781 agccctggag ctctagccgg ggccggagtg ggagcggcgg ggcccttgga gagacggggg 841 gcgcaacccg gacgacactc tgtgaccggc tacggggact gcgccgtggg cgcccggtac 901 caggacgagc taacagcttt gcttcgcctg acggtgggca ccggtgggcg agaagccgga 961 gcccgcggag aaccctcggg gattgagccg tcgggtctgg aggagccacc aggtcctttc 1021 gttccggagg ccgcccgggc ccggatgcgg gagccagagg ccagggagga ctacttcggc 1081 acctgtatca agtgcaacaa aggcatctat gggcagagca atgcctgcca ggccctggac 1141 agcctctacc acacccagtg ctttgtttgc tgctcttgtg ggcgaacttt gcgttgcaag 1201 gctttctaca gtgtcaatgg ctctgtgtac tgtgaggaag attatctgtt ttcagggttt 1261 caggaggcag ctgagaaatg ctgtgtctgt ggtcacttga ttttggagaa gatcctacaa 1321 gcaatgggga agtcctatca tccaggctgt ttccgatgca ttgtttgcaa caagtgcctg 1381 gatggcatcc ccttcacagt ggacttctcc aaccaagtat actgtgtcac cgactaccac 1441 aaaaattatg ctcctaagtg tgcagcctgt ggccaaccca tcctcccctc tgagggctgt 1501 gaggacatcg tgagggtgat atccatggac cgggattatc actttgagtg ctaccactgt 1561 gaggactgcc ggatgcagct gagtgatgag gaaggctgct gctgtttccc tctggatggg 1621 cacttgctct gccatggttg ccacatgcag cggctcaatg cccgacaacc ccctgccaac 1681 tatatctgag ctgcaatcac tgctgctgct gtcaccctgc agacaaactg ctgtggccag 1741 tgggcccctc tgaggccagc caaggcaaag aatgcactct gcaggcctgg cagaagagtc 1801 ctctggggag gaccccaagg gccggagacc caaagatcat gatattccaa atggattgtg 1861 gaagagaaac cttatattta ccagggtggg ggcgactggc ctttttccca tgtgtgcagt 1921 ctgagcttag gcacacacag gagggttcca ggactttctg aacatctgat tctgtatctt 1981 cagtatatat attttgtttg ttttagagat gggatctcac catgttgccc aggctagtct 2041 tgaactcctg ggctcgaatg atcctcccac cttggcctcc caaggtgctg ggattatagg 2101 cgtaagccac tgtgtctggc ctagtgtatg attatgcatg agtcacgcaa tgttctggtc 2161 ctggattcca ggagtagagg acctagcttt aaatcaatta gtttcagttt gcttgaaact 2221 agttcaccta aagctagatc tcttaaaacc aatttactga aaacttgttt gcttaaagtt 2281 aatgacttaa tgactaattt gccaaaagct caattcctat tttggtgtgt ttatatccat 2341 ttaggtgtcc tattcttttt tgtcatgctt tggatatttc aaggatttat atctattcat 2401 ccaagagtac ttctgagcta ttatcagcaa cataaattta tcaaatttgc agcactttgt 2461 aaatgatgag attgcttcct acctttatgg atgtcttttt ctatgttatc taccattcaa 2521 aaactttttt aaaaagttta aagtttctag caataaatac aattggtaca gaaaaaaaaa 2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaacc tcggg //