LOCUS BC007315 2527 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 7, mRNA (cDNA clone MGC:1092 IMAGE:2989585), complete cds. ACCESSION BC007315 VERSION BC007315.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2527) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2527) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC007315.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 3 Row: o Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 17978498. FEATURES Location/Qualifiers source 1..2527 /db_xref="H-InvDB:HIT000033140" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1092 IMAGE:2989585" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2527 /gene="CNOT7" /gene_synonym="CAF1" /gene_synonym="hCAF-1" /db_xref="GeneID:29883" /db_xref="MIM:604913" CDS 262..1002 /gene="CNOT7" /gene_synonym="CAF1" /gene_synonym="hCAF-1" /codon_start=1 /product="CNOT7 protein" /protein_id="AAH07315.1" /db_xref="GeneID:29883" /db_xref="MIM:604913" /translation="MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFP GVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFN LTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMISGVVLCEGVKWLSFHSGY DFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL ERIGPQHQAGSDSLLTGNAYEEEANKQS" misc_feature 262..975 /gene="CNOT7" /gene_synonym="CAF1" /gene_synonym="hCAF-1" /note="POP2; Region: COG5228, POP2, mRNA deadenylase subunit [RNA processing and modification]" /db_xref="CDD:COG5228" BASE COUNT 774 a 471 c 479 g 803 t ORIGIN 1 gcagcacggt gcggcgcagc tcctgctcgc ctttcccttc gctgggcgag aggtgtctat 61 ggggcacccg ctgccgccgc cgctaccgcc accgccaccg ccaccgccgc cgagtgctgt 121 ctctatggcg aggaggagga ggaggagcgc gagctcagcg acacaagtac ataaataaag 181 gataaaatat tttatgaaac aaatcttcaa tcaagtataa cattttgatg cttggcatct 241 agactccctt gtgccctcac tatgccagcg gcaactgtag atcatagcca aagaatttgt 301 gaagtttggg cttgcaactt ggatgaagag atgaagaaaa ttcgtcaagt tatccgaaaa 361 tataattacg ttgctatgga caccgagttt ccaggtgtgg ttgcaagacc cattggagaa 421 ttcaggagca atgctgacta tcaataccaa ctattgcggt gtaatgtaga cttgttaaag 481 ataattcagc taggactgac atttatgaat gagcaaggag aataccctcc aggaacttca 541 acttggcagt ttaattttaa atttaatttg acggaggaca tgtatgccca ggactctata 601 gagctactaa caacatctgg tatccagttt aaaaaacatg aggaggaagg aattgaaacc 661 cagtactttg cagaacttct tatgatttct ggagtggtcc tctgtgaagg ggtcaaatgg 721 ttgtcatttc atagcggtta cgactttggc tacttaatca aaatcctaac caactctaac 781 ttgcctgaag aagaacttga cttctttgag atccttcgat tgttttttcc tgtcatttat 841 gatgtgaagt acctcatgaa gagctgcaaa aatctcaaag gtggattaca ggaggtggca 901 gaacagttag agctggaacg gataggacca caacatcagg caggatctga ttcattgctc 961 acagggaatg catatgaaga ggaagccaac aagcagtcat gacatgaaat agtcctttta 1021 tttttatttc gagctacaca catgcttgta tataggtttt atctctggtt gaatccctcg 1081 aacaatagac agtacctttc cccccccttt catggcccat tttattgtct gcctttcagt 1141 actaagtatg accgttccta tctcagatct taataaaaag aaaaaaaaaa acgcattcag 1201 gttaaatttg gccttaattt aatatacttg ttagcaagcg tgtgtgacag agagtgggga 1261 aagctacatc attgaatatt ttgataaact ttaccgactt gagtttggtt tatttttccc 1321 ttttcctaaa ttaactagca ctgactgtaa tttatttccc tgtttcacgt ctctcccttc 1381 cattctgcag gagttttagc tatttgagat cgtggaccat cagttttgca ctttagagag 1441 tgtttctgac tctaaacctg ttttatcaga aaatttgttt tttcttgatc ttagctggaa 1501 aaatctgcca actttacaca gtatttactt ggttttgacc cacagaatat agcacgttgt 1561 gcaaactgtc gattcagcga aacttaaaaa agacaagaaa ctactgagga gcttagtaac 1621 tgctgtttct gtacgtagtg tttaatcttc caagcacatc tagtgtctgt cagtttctaa 1681 ttggcatgtg taggctgctc tgtgactgaa gaattttcaa accagcttta cacccttcag 1741 gaaaaatccc ttgtgattgg atgtttacta tctgccagga aactggtact caagatgttg 1801 aagctacagt tattttatga tagcacactt cccttgatct gcttattttt attccatcac 1861 catttaccct tttttttttt ttaaattttg tagccattct tatgatgctc ttgatttgtt 1921 ggttacacaa atcaatttta ttaaaaatcc aaagataagt ctttaggtat attttgtacc 1981 aaattaaatt agaagacaaa aattgtgctt tcatagttgc tacaaaggta aataatggag 2041 agatttggta caaaacaaca aaatatatat atattctcat atatatatat atagctgata 2101 aaattacctg aggagtgtaa tgcttatttt ttttgtgtat atctttgcaa tctattttat 2161 atatattgac aaaagagact gtgaaatact tagccatgca gaatatgtga ccagaccaga 2221 gcatgtgtag gaagacttta cggtaatcat taactctacc ccgaaatgat ggactacaag 2281 ttataatgtg tgttacctac acttcaatca gtaatattag caaatctcca aatgttagtc 2341 acattggttt gtctcccttg tacattcttt attcatgata ttacagtgct gtaactgggt 2401 ggtccttttt aaacaaaaca ttatttgcaa aacagagggt attatttgtt tttaaagctt 2461 ttgtaaataa aggcttcaaa atgttttctt ataaaaaaaa aaaaaaaaaa aaaaaaaaaa 2521 aaaaaaa //