LOCUS BC007315 2527 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 7, mRNA (cDNA
clone MGC:1092 IMAGE:2989585), complete cds.
ACCESSION BC007315
VERSION BC007315.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2527)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2527)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007315.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: o Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17978498.
FEATURES Location/Qualifiers
source 1..2527
/db_xref="H-InvDB:HIT000033140"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1092 IMAGE:2989585"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2527
/gene="CNOT7"
/gene_synonym="CAF1"
/gene_synonym="hCAF-1"
/db_xref="GeneID:29883"
/db_xref="MIM:604913"
CDS 262..1002
/gene="CNOT7"
/gene_synonym="CAF1"
/gene_synonym="hCAF-1"
/codon_start=1
/product="CNOT7 protein"
/protein_id="AAH07315.1"
/db_xref="GeneID:29883"
/db_xref="MIM:604913"
/translation="MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFP
GVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFN
LTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMISGVVLCEGVKWLSFHSGY
DFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLEL
ERIGPQHQAGSDSLLTGNAYEEEANKQS"
misc_feature 262..975
/gene="CNOT7"
/gene_synonym="CAF1"
/gene_synonym="hCAF-1"
/note="POP2; Region: COG5228, POP2, mRNA deadenylase
subunit [RNA processing and modification]"
/db_xref="CDD:COG5228"
BASE COUNT 774 a 471 c 479 g 803 t
ORIGIN
1 gcagcacggt gcggcgcagc tcctgctcgc ctttcccttc gctgggcgag aggtgtctat
61 ggggcacccg ctgccgccgc cgctaccgcc accgccaccg ccaccgccgc cgagtgctgt
121 ctctatggcg aggaggagga ggaggagcgc gagctcagcg acacaagtac ataaataaag
181 gataaaatat tttatgaaac aaatcttcaa tcaagtataa cattttgatg cttggcatct
241 agactccctt gtgccctcac tatgccagcg gcaactgtag atcatagcca aagaatttgt
301 gaagtttggg cttgcaactt ggatgaagag atgaagaaaa ttcgtcaagt tatccgaaaa
361 tataattacg ttgctatgga caccgagttt ccaggtgtgg ttgcaagacc cattggagaa
421 ttcaggagca atgctgacta tcaataccaa ctattgcggt gtaatgtaga cttgttaaag
481 ataattcagc taggactgac atttatgaat gagcaaggag aataccctcc aggaacttca
541 acttggcagt ttaattttaa atttaatttg acggaggaca tgtatgccca ggactctata
601 gagctactaa caacatctgg tatccagttt aaaaaacatg aggaggaagg aattgaaacc
661 cagtactttg cagaacttct tatgatttct ggagtggtcc tctgtgaagg ggtcaaatgg
721 ttgtcatttc atagcggtta cgactttggc tacttaatca aaatcctaac caactctaac
781 ttgcctgaag aagaacttga cttctttgag atccttcgat tgttttttcc tgtcatttat
841 gatgtgaagt acctcatgaa gagctgcaaa aatctcaaag gtggattaca ggaggtggca
901 gaacagttag agctggaacg gataggacca caacatcagg caggatctga ttcattgctc
961 acagggaatg catatgaaga ggaagccaac aagcagtcat gacatgaaat agtcctttta
1021 tttttatttc gagctacaca catgcttgta tataggtttt atctctggtt gaatccctcg
1081 aacaatagac agtacctttc cccccccttt catggcccat tttattgtct gcctttcagt
1141 actaagtatg accgttccta tctcagatct taataaaaag aaaaaaaaaa acgcattcag
1201 gttaaatttg gccttaattt aatatacttg ttagcaagcg tgtgtgacag agagtgggga
1261 aagctacatc attgaatatt ttgataaact ttaccgactt gagtttggtt tatttttccc
1321 ttttcctaaa ttaactagca ctgactgtaa tttatttccc tgtttcacgt ctctcccttc
1381 cattctgcag gagttttagc tatttgagat cgtggaccat cagttttgca ctttagagag
1441 tgtttctgac tctaaacctg ttttatcaga aaatttgttt tttcttgatc ttagctggaa
1501 aaatctgcca actttacaca gtatttactt ggttttgacc cacagaatat agcacgttgt
1561 gcaaactgtc gattcagcga aacttaaaaa agacaagaaa ctactgagga gcttagtaac
1621 tgctgtttct gtacgtagtg tttaatcttc caagcacatc tagtgtctgt cagtttctaa
1681 ttggcatgtg taggctgctc tgtgactgaa gaattttcaa accagcttta cacccttcag
1741 gaaaaatccc ttgtgattgg atgtttacta tctgccagga aactggtact caagatgttg
1801 aagctacagt tattttatga tagcacactt cccttgatct gcttattttt attccatcac
1861 catttaccct tttttttttt ttaaattttg tagccattct tatgatgctc ttgatttgtt
1921 ggttacacaa atcaatttta ttaaaaatcc aaagataagt ctttaggtat attttgtacc
1981 aaattaaatt agaagacaaa aattgtgctt tcatagttgc tacaaaggta aataatggag
2041 agatttggta caaaacaaca aaatatatat atattctcat atatatatat atagctgata
2101 aaattacctg aggagtgtaa tgcttatttt ttttgtgtat atctttgcaa tctattttat
2161 atatattgac aaaagagact gtgaaatact tagccatgca gaatatgtga ccagaccaga
2221 gcatgtgtag gaagacttta cggtaatcat taactctacc ccgaaatgat ggactacaag
2281 ttataatgtg tgttacctac acttcaatca gtaatattag caaatctcca aatgttagtc
2341 acattggttt gtctcccttg tacattcttt attcatgata ttacagtgct gtaactgggt
2401 ggtccttttt aaacaaaaca ttatttgcaa aacagagggt attatttgtt tttaaagctt
2461 ttgtaaataa aggcttcaaa atgttttctt ataaaaaaaa aaaaaaaaaa aaaaaaaaaa
2521 aaaaaaa
//