LOCUS BC006462 1227 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae), mRNA (cDNA clone MGC:2095 IMAGE:3546125), complete cds. ACCESSION BC006462 VERSION BC006462.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1227) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1227) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 8 Row: f Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 54792063. FEATURES Location/Qualifiers source 1..1227 /db_xref="H-InvDB:HIT000032848" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2095 IMAGE:3546125" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1227 /gene="SUMO1" /gene_synonym="GMP1" /gene_synonym="PIC1" /gene_synonym="SENP2" /gene_synonym="SMT3" /gene_synonym="SMT3C" /gene_synonym="SMT3H3" /gene_synonym="SUMO-1" /db_xref="GeneID:7341" /db_xref="HGNC:HGNC:12502" /db_xref="MIM:601912" CDS 132..437 /gene="SUMO1" /gene_synonym="GMP1" /gene_synonym="PIC1" /gene_synonym="SENP2" /gene_synonym="SMT3" /gene_synonym="SMT3C" /gene_synonym="SMT3H3" /gene_synonym="SUMO-1" /codon_start=1 /product="SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)" /protein_id="AAH06462.1" /db_xref="GeneID:7341" /db_xref="HGNC:HGNC:12502" /db_xref="MIM:601912" /translation="MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHL KKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV" BASE COUNT 386 a 208 c 259 g 374 t ORIGIN 1 cgtagcggaa gttactgcag ccgcggtgtt gtgctgtggg gaagggagaa ggatttgtaa 61 accccggagc gaggttctgc ttacccgagg ccgctgctgt gcggagaccc ccgggtgaag 121 ccaccgtcat catgtctgac caggaggcaa aaccttcaac tgaggacttg ggggataaga 181 aggaaggtga atatattaaa ctcaaagtca ttggacagga tagcagtgag attcacttca 241 aagtgaaaat gacaacacat ctcaagaaac tcaaagaatc atactgtcaa agacagggtg 301 ttccaatgaa ttcactcagg tttctctttg agggtcagag aattgctgat aatcatactc 361 caaaagaact gggaatggag gaagaagatg tgattgaagt ttatcaggaa caaacggggg 421 gtcattcaac agtttagata ttctttttat ttttttttct tttccctcaa tcctttttta 481 tttttaaaaa tagttctttt gtaatgtggt gttcaaaacg gaattgaaaa ctggcacccc 541 atctctttga aacatctggt aatttgaatt ctagtgctca ttattcatta ttgtttgttt 601 tcattgtgct gatttttggt gatcaagcct cagtcccctt catattaccc tctccttttt 661 aaaaattacg tgtgcacaga gaggtcacct ttttcaggac attgcatttt caggcttgtg 721 gtgataaata agatcgacca atgcaagtgt tcataatgac tttccaattg gccctgatgt 781 tctagcatgt gattacttca ctcctggact gtgactttca gtgggagatg gaagtttttc 841 agagaactga actgtggaaa aatgaccttt ccttaacttg aagctacttt taaaatttga 901 gggtctggac caaaagaaga ggaatatcag gttgaagtca agatgacaga taaggtgaga 961 gtaatgacta actccaaaga tggcttcact gaagaaaagg cattttaaga ttttttaaaa 1021 atcttgtcag aagatcccag aaaagttcta attttcatta gcaattaata aagctataca 1081 tgcagaaatg aatacaacag aacactgctc tttttgattt tatttgtact ttttggcctg 1141 ggatatgggt tttaaatgga cattgtctgt accagcttca ttaaaataaa caatatttgt 1201 aaaaatcaaa aaaaaaaaaa aaaaaaa //