LOCUS BC006462 1227 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SMT3 suppressor of mif two 3 homolog 1 (S.
cerevisiae), mRNA (cDNA clone MGC:2095 IMAGE:3546125), complete
cds.
ACCESSION BC006462
VERSION BC006462.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1227)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1227)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: f Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54792063.
FEATURES Location/Qualifiers
source 1..1227
/db_xref="H-InvDB:HIT000032848"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2095 IMAGE:3546125"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1227
/gene="SUMO1"
/gene_synonym="GMP1"
/gene_synonym="PIC1"
/gene_synonym="SENP2"
/gene_synonym="SMT3"
/gene_synonym="SMT3C"
/gene_synonym="SMT3H3"
/gene_synonym="SUMO-1"
/db_xref="GeneID:7341"
/db_xref="HGNC:HGNC:12502"
/db_xref="MIM:601912"
CDS 132..437
/gene="SUMO1"
/gene_synonym="GMP1"
/gene_synonym="PIC1"
/gene_synonym="SENP2"
/gene_synonym="SMT3"
/gene_synonym="SMT3C"
/gene_synonym="SMT3H3"
/gene_synonym="SUMO-1"
/codon_start=1
/product="SMT3 suppressor of mif two 3 homolog 1 (S.
cerevisiae)"
/protein_id="AAH06462.1"
/db_xref="GeneID:7341"
/db_xref="HGNC:HGNC:12502"
/db_xref="MIM:601912"
/translation="MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHL
KKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTV"
BASE COUNT 386 a 208 c 259 g 374 t
ORIGIN
1 cgtagcggaa gttactgcag ccgcggtgtt gtgctgtggg gaagggagaa ggatttgtaa
61 accccggagc gaggttctgc ttacccgagg ccgctgctgt gcggagaccc ccgggtgaag
121 ccaccgtcat catgtctgac caggaggcaa aaccttcaac tgaggacttg ggggataaga
181 aggaaggtga atatattaaa ctcaaagtca ttggacagga tagcagtgag attcacttca
241 aagtgaaaat gacaacacat ctcaagaaac tcaaagaatc atactgtcaa agacagggtg
301 ttccaatgaa ttcactcagg tttctctttg agggtcagag aattgctgat aatcatactc
361 caaaagaact gggaatggag gaagaagatg tgattgaagt ttatcaggaa caaacggggg
421 gtcattcaac agtttagata ttctttttat ttttttttct tttccctcaa tcctttttta
481 tttttaaaaa tagttctttt gtaatgtggt gttcaaaacg gaattgaaaa ctggcacccc
541 atctctttga aacatctggt aatttgaatt ctagtgctca ttattcatta ttgtttgttt
601 tcattgtgct gatttttggt gatcaagcct cagtcccctt catattaccc tctccttttt
661 aaaaattacg tgtgcacaga gaggtcacct ttttcaggac attgcatttt caggcttgtg
721 gtgataaata agatcgacca atgcaagtgt tcataatgac tttccaattg gccctgatgt
781 tctagcatgt gattacttca ctcctggact gtgactttca gtgggagatg gaagtttttc
841 agagaactga actgtggaaa aatgaccttt ccttaacttg aagctacttt taaaatttga
901 gggtctggac caaaagaaga ggaatatcag gttgaagtca agatgacaga taaggtgaga
961 gtaatgacta actccaaaga tggcttcact gaagaaaagg cattttaaga ttttttaaaa
1021 atcttgtcag aagatcccag aaaagttcta attttcatta gcaattaata aagctataca
1081 tgcagaaatg aatacaacag aacactgctc tttttgattt tatttgtact ttttggcctg
1141 ggatatgggt tttaaatgga cattgtctgt accagcttca ttaaaataaa caatatttgt
1201 aaaaatcaaa aaaaaaaaaa aaaaaaa
//