LOCUS BC006238 2745 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens suppressor of variegation 3-9 homolog 1 (Drosophila), mRNA (cDNA clone MGC:10376 IMAGE:3945632), complete cds. ACCESSION BC006238 VERSION BC006238.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2745) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2745) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Nov 6, 2003 this sequence version replaced BC006238.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 15 Row: d Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4507320. FEATURES Location/Qualifiers source 1..2745 /db_xref="H-InvDB:HIT000032695" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10376 IMAGE:3945632" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2745 /gene="SUV39H1" /gene_synonym="MG44" /db_xref="GeneID:6839" /db_xref="HGNC:HGNC:11479" /db_xref="MIM:300254" CDS 44..1282 /gene="SUV39H1" /gene_synonym="MG44" /codon_start=1 /product="suppressor of variegation 3-9 homolog 1 (Drosophila)" /protein_id="AAH06238.1" /db_xref="GeneID:6839" /db_xref="HGNC:HGNC:11479" /db_xref="MIM:300254" /translation="MAENLKGCSVCCKSSWNQLQDLCRLAKLSCPALGISKRNLYDFE VEYLCDYKKIREQEYYLVKWRGYPDSESTWEPRQNLKCVRILKQFHKDLERELLRRHH RSKTPRHLDPSLANYLVQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAF VYINEYRVGEGITLNQVAVGCECQDCLWAPTGGCCPGASLHKFAYNDQGQVRLRAGLP IYECNSRCRCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGE IITSEEAERRGQIYDRQGATYLFDLDYVEDVYTVDAAYYGNISHFVNHSCDPNLQVYN VFIDNLDERLPRIAFFATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSP KKRVRIECKCGTESCRKYLF" BASE COUNT 608 a 782 c 790 g 565 t ORIGIN 1 cgcgaggccg gctaggcccg aatgtcgtta gccgtgggga aagatggcgg aaaatttaaa 61 aggctgcagc gtgtgttgca agtcttcttg gaatcagctg caggacctgt gccgcctggc 121 caagctctcc tgccctgccc tcggtatctc taagaggaac ctctatgact ttgaagtcga 181 gtacctgtgc gattacaaga agatccgcga acaggaatat tacctggtga aatggcgtgg 241 atatccagac tcagagagca cctgggagcc acggcagaat ctcaagtgtg tgcgtatcct 301 caagcagttc cacaaggact tagaaaggga gctgctccgg cggcaccacc ggtcaaagac 361 cccccggcac ctggacccaa gcttggccaa ctacctggtg cagaaggcca agcagaggcg 421 ggcgctccgt cgctgggagc aggagctcaa tgccaagcgc agccatctgg gacgcatcac 481 tgtagagaat gaggtggacc tggacggccc tccgcgggcc ttcgtgtaca tcaatgagta 541 ccgtgttggt gagggcatca ccctcaacca ggtggctgtg ggctgcgagt gccaggactg 601 tctgtgggca cccactggag gctgctgccc gggggcgtca ctgcacaagt ttgcctacaa 661 tgaccagggc caggtgcggc ttcgagccgg gctgcccatc tacgagtgca actcccgctg 721 ccgctgcggc tatgactgcc caaatcgtgt ggtacagaag ggtatccgat atgacctctg 781 catcttccgc acggatgatg ggcgtggctg gggcgtccgc accctggaga agattcgcaa 841 gaacagcttc gtcatggagt acgtgggaga gatcattacc tcagaggagg cagagcggcg 901 gggccagatc tacgaccgtc agggcgccac ctacctcttt gacctggact acgtggagga 961 cgtgtacacc gtggatgccg cctactatgg caacatctcc cactttgtca accacagttg 1021 tgaccccaac ctgcaggtgt acaacgtctt catagacaac cttgacgagc ggctgccccg 1081 catcgctttc tttgccacaa gaaccatccg ggcaggcgag gagctcacct ttgattacaa 1141 catgcaagtg gaccccgtgg acatggagag cacccgcatg gactccaact ttggcctggc 1201 tgggctccct ggctccccta agaagcgggt ccgtattgaa tgcaagtgtg ggactgagtc 1261 ctgccgcaaa tacctcttct agcccttaga agtctgaggc cagactgact gagggggcct 1321 gaagctacat gcacctcccc cactgctgcc ctcctgtcga gaatgactgc cagggcctcg 1381 cctgcctcca cctgccccca cctgctccta cctgctctac gttcagggct gtggccgtgg 1441 tgaggaccga ctccaggagt cccctttccc tgtcccagcc ccatctgtgg gttgcactta 1501 caaaccccca cccaccttca gaaatagttt ttcaacatca agactctctg tcgttgggat 1561 tcatggccta ttaaggaggt ccaaggggtg agtcccaacc cagccccaga atatatttgt 1621 ttttgcacct gcttctgcct ggagattgag gggtctgctg caggcctcct ccctgctgcc 1681 ccaaaggtat ggggaagcaa ccccagagca ggcagacatc agaggccaga gtgcctagcc 1741 cgacatgaag ctggttcccc aaccacagaa actttgtact agtgaaagaa agggggtccc 1801 tgggctacgg gctgaggctg gtttctgctc gtgcttacag tgctgggtag tgttggccct 1861 aagagctgta gggtctcttc ttcagggctg catatctgag aagtggatgc ccacatgcca 1921 ctggaaggga agtgggtgtc catgggccac tgagcagtga gaggaaggca gtgcagagct 1981 ggccagccct ggaggtaggc tgggaccaag ctctgccttc acagtgcagt gaaggtacct 2041 agggctcttg ggagctctgc ggttgctagg ggccctgacc tggggtgtca tgaccgctga 2101 caccactcag agctggaacc aagatctaga tagtccgtag atagcactta ggacaagaat 2161 gtgcattgat ggggtggtga tgaggtgcca ggcactgggt agagcacctg gtccacgtgg 2221 attgtctcag ggaagccttg aaaaccacgg aggtggatgc caggaaaggg cccatgtggc 2281 agaaggcaaa gtacaggcca agaattgggg gtgggggaga tggcttcccc actatgggat 2341 gacgaggcga gagggaagcc cttgctgcct gccattccca gaccccagcc ctttgtgctc 2401 accctggttc cactggtctc aaaagtcacc tgcctacaaa tgtacaaaag gcgaaggttc 2461 tgatggctgc cttgctcctt gctcccccac cccctgtgag gacttctcta ggaagtcctt 2521 cctgactacc tgtgcccaga gtgcccctac atgagactgt atgccctgct atcagatgcc 2581 agatctatgt gtctgtctgt gtgtccatcc cgccgacccc ccagactaac ctccaggcat 2641 ggactgaatc tggttctcct cttgtacacc cctcaaccct atgcagcctg gagtgggcat 2701 caataaaatg aactgtcgac tgaaaaaaaa aaaaaaaaaa aaaaa //