LOCUS BC006238 2745 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens suppressor of variegation 3-9 homolog 1 (Drosophila),
mRNA (cDNA clone MGC:10376 IMAGE:3945632), complete cds.
ACCESSION BC006238
VERSION BC006238.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2745)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2745)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-APR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC006238.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: d Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507320.
FEATURES Location/Qualifiers
source 1..2745
/db_xref="H-InvDB:HIT000032695"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10376 IMAGE:3945632"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2745
/gene="SUV39H1"
/gene_synonym="MG44"
/db_xref="GeneID:6839"
/db_xref="HGNC:HGNC:11479"
/db_xref="MIM:300254"
CDS 44..1282
/gene="SUV39H1"
/gene_synonym="MG44"
/codon_start=1
/product="suppressor of variegation 3-9 homolog 1
(Drosophila)"
/protein_id="AAH06238.1"
/db_xref="GeneID:6839"
/db_xref="HGNC:HGNC:11479"
/db_xref="MIM:300254"
/translation="MAENLKGCSVCCKSSWNQLQDLCRLAKLSCPALGISKRNLYDFE
VEYLCDYKKIREQEYYLVKWRGYPDSESTWEPRQNLKCVRILKQFHKDLERELLRRHH
RSKTPRHLDPSLANYLVQKAKQRRALRRWEQELNAKRSHLGRITVENEVDLDGPPRAF
VYINEYRVGEGITLNQVAVGCECQDCLWAPTGGCCPGASLHKFAYNDQGQVRLRAGLP
IYECNSRCRCGYDCPNRVVQKGIRYDLCIFRTDDGRGWGVRTLEKIRKNSFVMEYVGE
IITSEEAERRGQIYDRQGATYLFDLDYVEDVYTVDAAYYGNISHFVNHSCDPNLQVYN
VFIDNLDERLPRIAFFATRTIRAGEELTFDYNMQVDPVDMESTRMDSNFGLAGLPGSP
KKRVRIECKCGTESCRKYLF"
BASE COUNT 608 a 782 c 790 g 565 t
ORIGIN
1 cgcgaggccg gctaggcccg aatgtcgtta gccgtgggga aagatggcgg aaaatttaaa
61 aggctgcagc gtgtgttgca agtcttcttg gaatcagctg caggacctgt gccgcctggc
121 caagctctcc tgccctgccc tcggtatctc taagaggaac ctctatgact ttgaagtcga
181 gtacctgtgc gattacaaga agatccgcga acaggaatat tacctggtga aatggcgtgg
241 atatccagac tcagagagca cctgggagcc acggcagaat ctcaagtgtg tgcgtatcct
301 caagcagttc cacaaggact tagaaaggga gctgctccgg cggcaccacc ggtcaaagac
361 cccccggcac ctggacccaa gcttggccaa ctacctggtg cagaaggcca agcagaggcg
421 ggcgctccgt cgctgggagc aggagctcaa tgccaagcgc agccatctgg gacgcatcac
481 tgtagagaat gaggtggacc tggacggccc tccgcgggcc ttcgtgtaca tcaatgagta
541 ccgtgttggt gagggcatca ccctcaacca ggtggctgtg ggctgcgagt gccaggactg
601 tctgtgggca cccactggag gctgctgccc gggggcgtca ctgcacaagt ttgcctacaa
661 tgaccagggc caggtgcggc ttcgagccgg gctgcccatc tacgagtgca actcccgctg
721 ccgctgcggc tatgactgcc caaatcgtgt ggtacagaag ggtatccgat atgacctctg
781 catcttccgc acggatgatg ggcgtggctg gggcgtccgc accctggaga agattcgcaa
841 gaacagcttc gtcatggagt acgtgggaga gatcattacc tcagaggagg cagagcggcg
901 gggccagatc tacgaccgtc agggcgccac ctacctcttt gacctggact acgtggagga
961 cgtgtacacc gtggatgccg cctactatgg caacatctcc cactttgtca accacagttg
1021 tgaccccaac ctgcaggtgt acaacgtctt catagacaac cttgacgagc ggctgccccg
1081 catcgctttc tttgccacaa gaaccatccg ggcaggcgag gagctcacct ttgattacaa
1141 catgcaagtg gaccccgtgg acatggagag cacccgcatg gactccaact ttggcctggc
1201 tgggctccct ggctccccta agaagcgggt ccgtattgaa tgcaagtgtg ggactgagtc
1261 ctgccgcaaa tacctcttct agcccttaga agtctgaggc cagactgact gagggggcct
1321 gaagctacat gcacctcccc cactgctgcc ctcctgtcga gaatgactgc cagggcctcg
1381 cctgcctcca cctgccccca cctgctccta cctgctctac gttcagggct gtggccgtgg
1441 tgaggaccga ctccaggagt cccctttccc tgtcccagcc ccatctgtgg gttgcactta
1501 caaaccccca cccaccttca gaaatagttt ttcaacatca agactctctg tcgttgggat
1561 tcatggccta ttaaggaggt ccaaggggtg agtcccaacc cagccccaga atatatttgt
1621 ttttgcacct gcttctgcct ggagattgag gggtctgctg caggcctcct ccctgctgcc
1681 ccaaaggtat ggggaagcaa ccccagagca ggcagacatc agaggccaga gtgcctagcc
1741 cgacatgaag ctggttcccc aaccacagaa actttgtact agtgaaagaa agggggtccc
1801 tgggctacgg gctgaggctg gtttctgctc gtgcttacag tgctgggtag tgttggccct
1861 aagagctgta gggtctcttc ttcagggctg catatctgag aagtggatgc ccacatgcca
1921 ctggaaggga agtgggtgtc catgggccac tgagcagtga gaggaaggca gtgcagagct
1981 ggccagccct ggaggtaggc tgggaccaag ctctgccttc acagtgcagt gaaggtacct
2041 agggctcttg ggagctctgc ggttgctagg ggccctgacc tggggtgtca tgaccgctga
2101 caccactcag agctggaacc aagatctaga tagtccgtag atagcactta ggacaagaat
2161 gtgcattgat ggggtggtga tgaggtgcca ggcactgggt agagcacctg gtccacgtgg
2221 attgtctcag ggaagccttg aaaaccacgg aggtggatgc caggaaaggg cccatgtggc
2281 agaaggcaaa gtacaggcca agaattgggg gtgggggaga tggcttcccc actatgggat
2341 gacgaggcga gagggaagcc cttgctgcct gccattccca gaccccagcc ctttgtgctc
2401 accctggttc cactggtctc aaaagtcacc tgcctacaaa tgtacaaaag gcgaaggttc
2461 tgatggctgc cttgctcctt gctcccccac cccctgtgag gacttctcta ggaagtcctt
2521 cctgactacc tgtgcccaga gtgcccctac atgagactgt atgccctgct atcagatgcc
2581 agatctatgt gtctgtctgt gtgtccatcc cgccgacccc ccagactaac ctccaggcat
2641 ggactgaatc tggttctcct cttgtacacc cctcaaccct atgcagcctg gagtgggcat
2701 caataaaatg aactgtcgac tgaaaaaaaa aaaaaaaaaa aaaaa
//