LOCUS BC005938 534 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae), mRNA (cDNA clone MGC:14558 IMAGE:4132686), complete cds. ACCESSION BC005938 VERSION BC005938.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 534) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 534) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 21 Row: j Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6912487. FEATURES Location/Qualifiers source 1..534 /db_xref="H-InvDB:HIT000032537" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14558 IMAGE:4132686" /tissue_type="Bone marrow, chronic myelogenous leukemia" /clone_lib="NIH_MGC_54" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..534 /gene="LSM5" /gene_synonym="YER146W" /db_xref="GeneID:23658" /db_xref="HGNC:HGNC:17162" /db_xref="MIM:607285" CDS 7..282 /gene="LSM5" /gene_synonym="YER146W" /codon_start=1 /product="LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)" /protein_id="AAH05938.1" /db_xref="GeneID:23658" /db_xref="HGNC:HGNC:17162" /db_xref="MIM:607285" /translation="MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFD DFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGPEV" BASE COUNT 186 a 77 c 114 g 157 t ORIGIN 1 gtagccatgg cggctaacgc tactaccaac ccgtcgcagc tgctgccgtt agagcttgtg 61 gacaaatgta taggatcaag aattcacatc gtgatgaaga gtgataagga aattgttggt 121 actcttctag gatttgatga ctttgtcaat atggtactgg aagatgtcac tgagtttgaa 181 atcacaccag aaggaagaag gattactaaa ttagatcaga ttttgctaaa tggaaataat 241 ataacaatgc tggttcctgg aggagaagga cctgaagtgt gaatgagttt ccttgactta 301 cactagattt tgttttggct tataatgaca agaaaatgga attttttttc ccactttcta 361 atgtttaaat cccataaagc taagtttccc gttaaaggga agtgctttga agatgtgtac 421 ccatttttgt aagttaacca tggttatcct ggaaaaagaa gaaaagagct tcttctttgc 481 agatgaaaat aaaggtgttt ttggtcaaaa aaaaaaaaaa aaaaaaaaaa aaaa //