LOCUS       BC005938                 534 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens LSM5 homolog, U6 small nuclear RNA associated (S.
            cerevisiae), mRNA (cDNA clone MGC:14558 IMAGE:4132686), complete
            cds.
ACCESSION   BC005938
VERSION     BC005938.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 534)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-APR-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 21 Row: j Column: 17
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 6912487.
FEATURES             Location/Qualifiers
     source          1..534
                     /db_xref="H-InvDB:HIT000032537"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:14558 IMAGE:4132686"
                     /tissue_type="Bone marrow, chronic myelogenous leukemia"
                     /clone_lib="NIH_MGC_54"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..534
                     /gene="LSM5"
                     /gene_synonym="YER146W"
                     /db_xref="GeneID:23658"
                     /db_xref="HGNC:HGNC:17162"
                     /db_xref="MIM:607285"
     CDS             7..282
                     /gene="LSM5"
                     /gene_synonym="YER146W"
                     /codon_start=1
                     /product="LSM5 homolog, U6 small nuclear RNA associated
                     (S. cerevisiae)"
                     /protein_id="AAH05938.1"
                     /db_xref="GeneID:23658"
                     /db_xref="HGNC:HGNC:17162"
                     /db_xref="MIM:607285"
                     /translation="MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFD
                     DFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGPEV"
BASE COUNT          186 a           77 c          114 g          157 t
ORIGIN      
        1 gtagccatgg cggctaacgc tactaccaac ccgtcgcagc tgctgccgtt agagcttgtg
       61 gacaaatgta taggatcaag aattcacatc gtgatgaaga gtgataagga aattgttggt
      121 actcttctag gatttgatga ctttgtcaat atggtactgg aagatgtcac tgagtttgaa
      181 atcacaccag aaggaagaag gattactaaa ttagatcaga ttttgctaaa tggaaataat
      241 ataacaatgc tggttcctgg aggagaagga cctgaagtgt gaatgagttt ccttgactta
      301 cactagattt tgttttggct tataatgaca agaaaatgga attttttttc ccactttcta
      361 atgtttaaat cccataaagc taagtttccc gttaaaggga agtgctttga agatgtgtac
      421 ccatttttgt aagttaacca tggttatcct ggaaaaagaa gaaaagagct tcttctttgc
      481 agatgaaaat aaaggtgttt ttggtcaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//