LOCUS BC005807 1314 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase), mRNA (cDNA clone IMAGE:3844850), complete cds. ACCESSION BC005807 VERSION BC005807.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1314) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1314) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC005807.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 14 Row: c Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 53759150 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1314 /db_xref="H-InvDB:HIT000032450" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3844850" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1314 /gene="SCD" /gene_synonym="FADS5" /gene_synonym="MSTP008" /gene_synonym="SCD1" /db_xref="GeneID:6319" /db_xref="HGNC:HGNC:10571" /db_xref="MIM:604031" CDS 178..1245 /gene="SCD" /gene_synonym="FADS5" /gene_synonym="MSTP008" /gene_synonym="SCD1" /codon_start=1 /product="SCD protein" /protein_id="AAH05807.1" /db_xref="GeneID:6319" /db_xref="HGNC:HGNC:10571" /db_xref="MIM:604031" /translation="MPAHLLQDDISSSYTTTTTITAPPSRVLQNGGDKLETMPLYLED DIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITLIPTCKFYTWL WGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAH HKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKLVMFQRRYY KPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPY DKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFTTFFIDCMAALGLAY DRKKVSKAAILARIKRTGDGN" BASE COUNT 352 a 365 c 302 g 295 t ORIGIN 1 aattcccggc tcggggacct ccacgcaccg cggctagcgc cgacaaccag ctagcgtgca 61 aggcgccgcg gctcagcgcg taccggcggg cttcgaaacc gcagtcctcc ggcgaccccg 121 aactccgctc cggagcctca gccccctgga aagtgatccc ggcatccgag agccaagatg 181 ccggcccact tgctgcagga cgatatctct agctcctata ccaccaccac caccattaca 241 gcgcctccct ccagggtcct gcagaatgga ggagataagt tggagacgat gcccctctac 301 ttggaagacg acattcgccc tgatataaaa gatgatatat atgaccccac ctacaaggat 361 aaggaaggcc caagccccaa ggttgaatat gtctggagaa acatcatcct tatgtctctg 421 ctacacttgg gagccctgta tgggatcact ttgattccta cctgcaagtt ctacacctgg 481 ctttgggggg tattctacta ttttgtcagt gccctgggca taacagcagg agctcatcgt 541 ctgtggagcc accgctctta caaagctcgg ctgcccctac ggctctttct gatcattgcc 601 aacacaatgg cattccagaa tgatgtctat gaatgggctc gtgaccaccg tgcccaccac 661 aagttttcag aaacacatgc tgatcctcat aattcccgac gtggcttttt cttctctcac 721 gtgggttggc tgcttgtgcg caaacaccca gctgtcaaag agaaggggag tacgctagac 781 ttgtctgacc tagaagctga gaaactggtg atgttccaga ggaggtacta caaacctggc 841 ttgctgatga tgtgcttcat cctgcccacg cttgtgccct ggtatttctg gggtgaaact 901 tttcaaaaca gtgtgttcgt tgccactttc ttgcgatatg ctgtggtgct taatgccacc 961 tggctggtga acagtgctgc ccacctcttc ggatatcgtc cttatgacaa gaacattagc 1021 ccccgggaga atatcctggt ttcacttgga gctgtgggtg agggcttcca caactaccac 1081 cactcctttc cctatgacta ctctgccagt gagtaccgct ggcacatcaa cttcaccaca 1141 ttcttcattg attgcatggc cgccctcggt ctggcctatg accggaagaa agtctccaag 1201 gccgccatct tggccaggat taaaagaacc ggagatggaa actaaaaaaa aaaaaaaaaa 1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaataaaa aaaaaaaaaa aaaa //