LOCUS BC005308 1254 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens transforming growth factor, alpha, mRNA (cDNA clone MGC:12380 IMAGE:3828239), complete cds. ACCESSION BC005308 VERSION BC005308.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1254) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1254) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 16 Row: k Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4507460. FEATURES Location/Qualifiers source 1..1254 /db_xref="H-InvDB:HIT000032364" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12380 IMAGE:3828239" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_58" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1254 /gene="TGFA" /gene_synonym="TFGA" /db_xref="GeneID:7039" /db_xref="HGNC:HGNC:11765" /db_xref="MIM:190170" CDS 60..539 /gene="TGFA" /gene_synonym="TFGA" /codon_start=1 /product="transforming growth factor, alpha" /protein_id="AAH05308.1" /db_xref="GeneID:7039" /db_xref="HGNC:HGNC:11765" /db_xref="MIM:190170" /translation="MVPSAGQLALFALGIVLAACQALENSTSPLSDPPVAAAVVSHFN DCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCEHADLLAVVAASQKKQAITAL VVVSIVALAVLIITCVLIHCCQVRKHCEWCRALICRHEKPSALLKGRTACCHSETVV" BASE COUNT 312 a 321 c 319 g 302 t ORIGIN 1 actcgggcac cgcaggtagg gcaggaggct ggagagcctg ctgcccgccc gcccgtaaaa 61 tggtcccctc ggctggacag ctcgccctgt tcgctctggg tattgtgttg gctgcgtgcc 121 aggccttgga gaacagcacg tccccgctga gtgacccgcc cgtggctgca gcagtggtgt 181 cccattttaa tgactgccca gattcccaca ctcagttctg cttccatgga acctgcaggt 241 ttttggtgca ggaggacaag ccagcatgtg tctgccattc tgggtacgtt ggtgcacgct 301 gtgagcatgc ggacctcctg gccgtggtgg ctgccagcca gaagaagcag gccatcaccg 361 ccttggtggt ggtctccatc gtggccctgg ctgtccttat catcacatgt gtgctgatac 421 actgctgcca ggtccgaaaa cactgtgagt ggtgccgggc cctcatctgc cggcacgaga 481 agcccagcgc cctcctgaag ggaagaaccg cttgctgcca ctcagaaaca gtggtctgaa 541 gagcccagag gaggagtttg gccaggtgga ctgtggcaga tcaataaaga aaggcttctt 601 caggacagca ctgccagaga tgcctgggtg tgccacagac cttcctactt ggcctgtaat 661 cacctgtgca gccttttgtg ggccttcaaa actctgtcaa gaactccgtc tgcttggggt 721 tattcagtgt gacctagaga agaaatcagc ggaccacgat ttcaagactt gttaaaaaag 781 aactgcaaag agacggactc ctgttcacct aggtgaggtg tgtgcagcag ttggtgtctg 841 agtccacatg tgtgcagttg tcttctgcca gccatggatt ccaggctata tatttctttt 901 taatgggcca cctccccaca acagaattct gcccaacaca ggagatttct atagttattg 961 ttttctgtca tttgcctact ggggaagaaa gtgaaggagg ggaaactgtt taatatcaca 1021 tgaagaccct agctttaaga gaagctgtat cctctaacca cgagaccctc aaccagccca 1081 acatcttcca tggacacatg acattgaaga ccatcccaag ctatcgccac ccttggagat 1141 gatgtcttat ttattagatg gataatggtt ttatttttaa tctcttaagt caatgtaaaa 1201 agtataaaac cccttcagac ttctaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //