LOCUS BC005308 1254 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transforming growth factor, alpha, mRNA (cDNA clone
MGC:12380 IMAGE:3828239), complete cds.
ACCESSION BC005308
VERSION BC005308.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1254)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1254)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: k Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507460.
FEATURES Location/Qualifiers
source 1..1254
/db_xref="H-InvDB:HIT000032364"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12380 IMAGE:3828239"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1254
/gene="TGFA"
/gene_synonym="TFGA"
/db_xref="GeneID:7039"
/db_xref="HGNC:HGNC:11765"
/db_xref="MIM:190170"
CDS 60..539
/gene="TGFA"
/gene_synonym="TFGA"
/codon_start=1
/product="transforming growth factor, alpha"
/protein_id="AAH05308.1"
/db_xref="GeneID:7039"
/db_xref="HGNC:HGNC:11765"
/db_xref="MIM:190170"
/translation="MVPSAGQLALFALGIVLAACQALENSTSPLSDPPVAAAVVSHFN
DCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCEHADLLAVVAASQKKQAITAL
VVVSIVALAVLIITCVLIHCCQVRKHCEWCRALICRHEKPSALLKGRTACCHSETVV"
BASE COUNT 312 a 321 c 319 g 302 t
ORIGIN
1 actcgggcac cgcaggtagg gcaggaggct ggagagcctg ctgcccgccc gcccgtaaaa
61 tggtcccctc ggctggacag ctcgccctgt tcgctctggg tattgtgttg gctgcgtgcc
121 aggccttgga gaacagcacg tccccgctga gtgacccgcc cgtggctgca gcagtggtgt
181 cccattttaa tgactgccca gattcccaca ctcagttctg cttccatgga acctgcaggt
241 ttttggtgca ggaggacaag ccagcatgtg tctgccattc tgggtacgtt ggtgcacgct
301 gtgagcatgc ggacctcctg gccgtggtgg ctgccagcca gaagaagcag gccatcaccg
361 ccttggtggt ggtctccatc gtggccctgg ctgtccttat catcacatgt gtgctgatac
421 actgctgcca ggtccgaaaa cactgtgagt ggtgccgggc cctcatctgc cggcacgaga
481 agcccagcgc cctcctgaag ggaagaaccg cttgctgcca ctcagaaaca gtggtctgaa
541 gagcccagag gaggagtttg gccaggtgga ctgtggcaga tcaataaaga aaggcttctt
601 caggacagca ctgccagaga tgcctgggtg tgccacagac cttcctactt ggcctgtaat
661 cacctgtgca gccttttgtg ggccttcaaa actctgtcaa gaactccgtc tgcttggggt
721 tattcagtgt gacctagaga agaaatcagc ggaccacgat ttcaagactt gttaaaaaag
781 aactgcaaag agacggactc ctgttcacct aggtgaggtg tgtgcagcag ttggtgtctg
841 agtccacatg tgtgcagttg tcttctgcca gccatggatt ccaggctata tatttctttt
901 taatgggcca cctccccaca acagaattct gcccaacaca ggagatttct atagttattg
961 ttttctgtca tttgcctact ggggaagaaa gtgaaggagg ggaaactgtt taatatcaca
1021 tgaagaccct agctttaaga gaagctgtat cctctaacca cgagaccctc aaccagccca
1081 acatcttcca tggacacatg acattgaaga ccatcccaag ctatcgccac ccttggagat
1141 gatgtcttat ttattagatg gataatggtt ttatttttaa tctcttaagt caatgtaaaa
1201 agtataaaac cccttcagac ttctaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//