LOCUS BC005051 1239 bp mRNA linear HUM 26-JUN-2008 DEFINITION Homo sapiens akirin 2, mRNA (cDNA clone MGC:12937 IMAGE:2820292), complete cds. ACCESSION BC005051 VERSION BC005051.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1239) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1239) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: a Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39725640. FEATURES Location/Qualifiers source 1..1239 /db_xref="H-InvDB:HIT000032185" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12937 IMAGE:2820292" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1239 /gene="AKIRIN2" /gene_synonym="dJ486L4.2" /db_xref="GeneID:55122" /db_xref="HGNC:HGNC:21407" CDS 262..873 /gene="AKIRIN2" /gene_synonym="dJ486L4.2" /codon_start=1 /product="akirin 2" /protein_id="AAH05051.1" /db_xref="GeneID:55122" /db_xref="HGNC:HGNC:21407" /translation="MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASPLSAA AATAASFSAAAASPQKYLRMEPSPFGDVSSRLTTEQILYNIKQEYKRMQKRRHLETSF QQTDPCCTSDAQPHAFLLSGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKERE EKVREEYEEILNTKLAEQYDAFVKFTHDQIMRRYGEQPASYVS" BASE COUNT 297 a 368 c 280 g 294 t ORIGIN 1 cctgacgcga ctggcgtgtg cttctgcccg ccaccgcccc tcccgctctc acccgggccg 61 tccctggcca ctgcccctgc cgcggaggca gcggcggcag cggctctcct ttccacagcc 121 ggcgctccgc gacccgcttg gctcctgagc ccgtcgggta ggctctcctc gagttcccgc 181 tcttcacccc ttccctcacc ctcttctttc gtcacccgtc cccgacccca cccgagcccg 241 gcgcctcagc tgcccccggc catggcgtgc ggagccactc tgaaaaggac tctggatttc 301 gacccgctgt tgagcccggc gtccccgaag cgcaggcgat gtgcgccatt gtcggcgccc 361 acctcggccg ctgcctcccc gttgtcggcg gccgcggcca ccgccgcctc cttctccgct 421 gcggccgcct cgccgcagaa gtatctccga atggagccat cccccttcgg cgacgtctcc 481 tcccgcctca ccacagaaca aattctgtac aacataaaac aagagtataa acgaatgcag 541 aagagaagac atttagaaac gagtttccaa cagacagatc cgtgttgtac ttctgatgca 601 cagccacatg catttctcct cagtggacca gcttcaccag ggacttcatc tgcagcatcc 661 tcaccattaa aaaaagaaca gcccttattt actctacggc aggttgggat gatctgtgaa 721 cgtttgttga aagaacgtga agagaaagtt cgagaagaat atgaagaaat attgaacaca 781 aaacttgcag aacaatatga tgcgtttgtg aagtttacgc atgatcaaat aatgcgacga 841 tatggagaac agcctgctag ctatgtttca tgaatcacgt atcctgcatt tgtgggctgc 901 cttgttcctt gttgagttgt tgcaagaggt cccaattatg acatgcagca atgccaatac 961 cccttctgtg aatacaggtt atttcaagct ttcgtcagtg gcaaccactc ttaggcagca 1021 gcaactggtt ttggaaattt ccctgatgtc agtaccacct ggatgtggac ctttgctacc 1081 tgtattaata ccagtggcct cattttgctg tatcattaca atttggcttc ttatattaat 1141 gtttgaaaag gattaaagct ggtattctag aacatgccct tcactggttg tgtaaataaa 1201 actgtagaat gacaaaaaaa aaaaaaaaaa aaaaaaaaa //