LOCUS BC005051 1239 bp mRNA linear HUM 26-JUN-2008
DEFINITION Homo sapiens akirin 2, mRNA (cDNA clone MGC:12937 IMAGE:2820292),
complete cds.
ACCESSION BC005051
VERSION BC005051.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1239)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1239)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 18 Row: a Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39725640.
FEATURES Location/Qualifiers
source 1..1239
/db_xref="H-InvDB:HIT000032185"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12937 IMAGE:2820292"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1239
/gene="AKIRIN2"
/gene_synonym="dJ486L4.2"
/db_xref="GeneID:55122"
/db_xref="HGNC:HGNC:21407"
CDS 262..873
/gene="AKIRIN2"
/gene_synonym="dJ486L4.2"
/codon_start=1
/product="akirin 2"
/protein_id="AAH05051.1"
/db_xref="GeneID:55122"
/db_xref="HGNC:HGNC:21407"
/translation="MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASPLSAA
AATAASFSAAAASPQKYLRMEPSPFGDVSSRLTTEQILYNIKQEYKRMQKRRHLETSF
QQTDPCCTSDAQPHAFLLSGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKERE
EKVREEYEEILNTKLAEQYDAFVKFTHDQIMRRYGEQPASYVS"
BASE COUNT 297 a 368 c 280 g 294 t
ORIGIN
1 cctgacgcga ctggcgtgtg cttctgcccg ccaccgcccc tcccgctctc acccgggccg
61 tccctggcca ctgcccctgc cgcggaggca gcggcggcag cggctctcct ttccacagcc
121 ggcgctccgc gacccgcttg gctcctgagc ccgtcgggta ggctctcctc gagttcccgc
181 tcttcacccc ttccctcacc ctcttctttc gtcacccgtc cccgacccca cccgagcccg
241 gcgcctcagc tgcccccggc catggcgtgc ggagccactc tgaaaaggac tctggatttc
301 gacccgctgt tgagcccggc gtccccgaag cgcaggcgat gtgcgccatt gtcggcgccc
361 acctcggccg ctgcctcccc gttgtcggcg gccgcggcca ccgccgcctc cttctccgct
421 gcggccgcct cgccgcagaa gtatctccga atggagccat cccccttcgg cgacgtctcc
481 tcccgcctca ccacagaaca aattctgtac aacataaaac aagagtataa acgaatgcag
541 aagagaagac atttagaaac gagtttccaa cagacagatc cgtgttgtac ttctgatgca
601 cagccacatg catttctcct cagtggacca gcttcaccag ggacttcatc tgcagcatcc
661 tcaccattaa aaaaagaaca gcccttattt actctacggc aggttgggat gatctgtgaa
721 cgtttgttga aagaacgtga agagaaagtt cgagaagaat atgaagaaat attgaacaca
781 aaacttgcag aacaatatga tgcgtttgtg aagtttacgc atgatcaaat aatgcgacga
841 tatggagaac agcctgctag ctatgtttca tgaatcacgt atcctgcatt tgtgggctgc
901 cttgttcctt gttgagttgt tgcaagaggt cccaattatg acatgcagca atgccaatac
961 cccttctgtg aatacaggtt atttcaagct ttcgtcagtg gcaaccactc ttaggcagca
1021 gcaactggtt ttggaaattt ccctgatgtc agtaccacct ggatgtggac ctttgctacc
1081 tgtattaata ccagtggcct cattttgctg tatcattaca atttggcttc ttatattaat
1141 gtttgaaaag gattaaagct ggtattctag aacatgccct tcactggttg tgtaaataaa
1201 actgtagaat gacaaaaaaa aaaaaaaaaa aaaaaaaaa
//