LOCUS BC005048 1123 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens haloacid dehalogenase-like hydrolase domain containing 3, mRNA (cDNA clone MGC:12904 IMAGE:3615096), complete cds. ACCESSION BC005048 VERSION BC005048.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1123) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1123) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC005048.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: g Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31377665. FEATURES Location/Qualifiers source 1..1123 /db_xref="H-InvDB:HIT000032182" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12904 IMAGE:3615096" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1123 /gene="HDHD3" /gene_synonym="2810435D12Rik" /gene_synonym="MGC12904" /db_xref="GeneID:81932" /db_xref="HGNC:HGNC:28171" CDS 176..931 /gene="HDHD3" /gene_synonym="2810435D12Rik" /gene_synonym="MGC12904" /codon_start=1 /product="haloacid dehalogenase-like hydrolase domain containing 3" /protein_id="AAH05048.1" /db_xref="GeneID:81932" /db_xref="HGNC:HGNC:28171" /translation="MAHRLQIRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSA LEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLY KDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRRLEGILGGLGLREHFDFVLTS EAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALD PVVRDSVPKEHILPSLAHLLPALDCLEGSTPGL" BASE COUNT 228 a 343 c 322 g 230 t ORIGIN 1 gatcttgtgc tgtgaagaca tttcccaagt gcttcatgtt agccagcaaa tctgacccac 61 aaggcctgga aagaggtgat tgttaggttg cgcagaggtg gtcttatcca gctcagcttc 121 ccctgggacc caccgtggga cctgaggcag aactggggtg gacttggcct cctccatggc 181 acaccggctg cagatacgac tgctgacgtg ggatgtgaag gacacgctgc tcaggctccg 241 ccacccctta ggggaggcct atgccaccaa ggcccgggcc catgggctgg aggtggagcc 301 ctcagccctg gaacaaggct tcaggcaggc atacagggct cagagccaca gcttccccaa 361 ctacggcctg agccacggcc taacctcccg ccagtggtgg ctggatgtgg tcctgcagac 421 cttccacctg gcgggtgtcc aggatgctca ggctgtagcc cccatcgctg aacagcttta 481 taaagacttc agccacccct gcacctggca ggtgttggat ggggctgagg acaccctgag 541 ggagtgccgc acacggggtc tgagactggc agtgatctcc aactttgacc gacggctaga 601 gggcatcctg gggggccttg gcctgcgtga acacttcgac tttgtgctga cctccgaggc 661 tgctggctgg cccaagccgg acccccgcat tttccaggag gccttgcggc ttgctcatat 721 ggaaccagta gtggcagccc atgttgggga taattacctc tgcgattacc aggggcctcg 781 ggctgtgggc atgcacagct tcctggtggt tggcccacag gcactggacc ccgtggtcag 841 ggattctgta cctaaagaac acatcctccc ctctctggcc catctcctgc ctgcccttga 901 ctgcctagag ggctcaactc cagggctttg aggccagtga gggaagtggc tgggccctag 961 gccatggaga aaaccttaaa caaaccctgg agacagggag ccccttcttt ctccacagct 1021 ctggaccttt ccccctctcc ctgcggcctt tgtcacctac tgtgataata aagcagtgag 1081 tgctgagctc tcacccttcc cccactaaaa aaaaaaaaaa aaa //