LOCUS BC004470 759 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens PYD and CARD domain containing, mRNA (cDNA clone MGC:10332 IMAGE:3678925), complete cds. ACCESSION BC004470 VERSION BC004470.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 759) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 759) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC004470.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 14 Row: g Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22035618. FEATURES Location/Qualifiers source 1..759 /db_xref="H-InvDB:HIT000031972" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10332 IMAGE:3678925" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..759 /gene="PYCARD" /gene_synonym="ASC" /gene_synonym="CARD5" /gene_synonym="MGC10332" /gene_synonym="TMS1" /db_xref="GeneID:29108" /db_xref="HGNC:HGNC:16608" /db_xref="MIM:606838" CDS 237..644 /gene="PYCARD" /gene_synonym="ASC" /gene_synonym="CARD5" /gene_synonym="MGC10332" /gene_synonym="TMS1" /codon_start=1 /product="PYD and CARD domain containing" /protein_id="AAH04470.1" /db_xref="GeneID:29108" /db_xref="HGNC:HGNC:16608" /db_xref="MIM:606838" /translation="MGRARDAILDALENLTAEELKKFKLQAATHQGSGAAPAGIQAPP QSAAKPGLHFIDQHRAALIARVTNVEWLLDALYGKVLTDEQYQAVRAEPTNPSKMRKL FSFTPAWNWTCKDLLLQALRESQSYLVEDLERS" BASE COUNT 166 a 227 c 251 g 115 t ORIGIN 1 gcgcgatcct ggcgtccccc gacggcctgg ggccccaatc cagaggcctg ggtgggaggg 61 gaccaagggt gtagtaagga agcgcctttt gctggagggc aacggaccgg ggcggggagt 121 cgggagacca gagtgggagg aaggcgggga gtccaggttc cgccccggag ccgacttcct 181 cctggtcggc ggctgcagcg gggtgagcgg cggcagcggc cggggatcct ggagccatgg 241 ggcgcgcgcg cgacgccatc ctggatgcgc tggagaacct gaccgccgag gagctcaaga 301 agttcaagct gcaggcggcc acgcaccagg gctctggagc cgcgccagct gggatccagg 361 cccctcctca gtcggcagcc aagccaggcc tgcactttat agaccagcac cgggctgcgc 421 ttatcgcgag ggtcacaaac gttgagtggc tgctggatgc tctgtacggg aaggtcctga 481 cggatgagca gtaccaggca gtgcgggccg agcccaccaa cccaagcaag atgcggaagc 541 tcttcagttt cacaccagcc tggaactgga cctgcaagga cttgctcctc caggccctaa 601 gggagtccca gtcctacctg gtggaggacc tggagcggag ctgaggctcc ttcccagcaa 661 cactccggtc agcccctggc aatcccacca aatcatcctg aatctgatct ttttatacac 721 aatatacgaa aagccagctt gaaaaaaaaa aaaaaaaaa //