LOCUS BC003361 1991 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1, mRNA (cDNA clone MGC:5270 IMAGE:2900516), complete cds. ACCESSION BC003361 VERSION BC003361.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1991) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1991) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: a Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4759139. FEATURES Location/Qualifiers source 1..1991 /db_xref="H-InvDB:HIT000031516" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5270 IMAGE:2900516" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1991 /gene="SLC9A3R1" /gene_synonym="EBP50" /gene_synonym="NHERF" /db_xref="GeneID:9368" /db_xref="HGNC:HGNC:11075" /db_xref="MIM:604990" CDS 206..1282 /gene="SLC9A3R1" /gene_synonym="EBP50" /gene_synonym="NHERF" /codon_start=1 /product="solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1" /protein_id="AAH03361.1" /db_xref="GeneID:9368" /db_xref="HGNC:HGNC:11075" /db_xref="MIM:604990" /translation="MSADAAAGAPLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEP GSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKL GVQVREELLRAQEAPGQAEPPAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKG PSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSA IRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEA ALESPRPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERA HQKRSSKRAPQMDWSKKNELFSNL" BASE COUNT 411 a 626 c 591 g 363 t ORIGIN 1 gcggggattg gtctgtgctc ctctctcggc tcctcgcggc tcgcggcggc cgacggttcc 61 tgggacacct gcttgcttgg cccgtccggc ggctcagggc ttctctgctg cgctcccggt 121 tcgctggacg ggaagaaggg ctgggccgtc ccgtcccgtc cccatcggaa ccccaagtcg 181 cgccgctgac ccgtcgcagg gcgagatgag cgcggacgca gcggccgggg cgcccctgcc 241 ccggctctgc tgcctggaga agggtccgaa cggctacggc ttccacctgc acggggagaa 301 gggcaagttg ggccagtaca tccggctggt ggagcccggc tcgccggccg agaaggcggg 361 gctgctggcg ggggaccggc tggtggaggt gaacggcgaa aacgtggaga aggagaccca 421 ccagcaggtg gtgagccgca tccgcgccgc actcaacgcc gtgcgcctgc tggtggtcga 481 ccccgagacg gacgagcagc tgcagaagct cggcgtccag gtccgagagg agctgctgcg 541 cgcccaggaa gcgccggggc aggccgagcc gccggccgcc gccgaggtgc agggggctgg 601 caacgaaaat gagcctcgcg aggccgacaa gagccacccg gagcagcgcg agcttcggcc 661 tcggctctgt accatgaaga agggccccag tggctatggc ttcaacctgc acagcgacaa 721 gtccaagcca ggccagttca tccggtcagt ggacccagac tccccggctg aggcttcagg 781 gctccgggcc caggatcgca ttgtggaggt gaacggggtc tgcatggagg ggaagcagca 841 tggggacgtg gtgtccgcca tcagggctgg cggggacgag accaagctgc tggtggtgga 901 cagggaaact gacgagttct tcaagaaatg cagagtgatc ccatctcagg agcacctgaa 961 tggtcccctg cctgtgccct tcaccaatgg ggagatacag aaggagaaca gtcgtgaagc 1021 cctggcagag gcagccttgg agagccccag gccagccctg gtgagatccg cctccagtga 1081 caccagcgag gagctgaatt cccaagacag ccccccaaaa caggactcca cagcgccctc 1141 gtctacctcc tcctccgacc ccatcctaga cttcaacatc tccctggcca tggccaaaga 1201 gagggcccac cagaaacgca gcagcaaacg ggccccgcag atggactgga gcaagaaaaa 1261 cgaactcttc agcaacctct gagcgccctg ctgccaccca gtgactggca gggccgagcc 1321 agcattccac cccacctttt tccttctccc caattactcc cctgaatcaa tgtacaaatc 1381 agcacccaca tcccctttct tgacaaatga tttttctaga gaactatgtt cttccctgac 1441 tttagggaag gtgaatgtgt tcccgtcctc ccgcagtcag aaaggagact ctgcctccct 1501 cctcctcact gagtgcctca tcctaccggg tgtccctttg ccaccctgcc tgggacatcg 1561 ctggaacctg caccatgcca ggatcatggg accaggcgag agggcaccct cccttcctcc 1621 cccatgtgat aaatgggtcc agggctgatc aaagaactct gactgcagaa ctgccgctct 1681 cagtggacag ggcatctgtt atcctgagac ctgtggcaga cacgtcttgt tttcatttga 1741 tttttgttaa gagtgcagta ttgcagagtc tagaggaatt tttgtttcct tgattaacat 1801 gattttcctg gttgttacat ccagggcatg gcagtggcct cagccttaaa cttttgttcc 1861 tactcccacc ctcagcgaac tgggcagcac ggggagggtt tggctacccc tgcccatccc 1921 tgagccaggt accaccattg taaggaaaca ctttcagaaa ttcagctggt tcctccaaaa 1981 aaaaaaaaaa a //