LOCUS BC003100 2858 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2, mRNA (cDNA clone MGC:1797 IMAGE:3502278), complete cds. ACCESSION BC003100 VERSION BC003100.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2858) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2858) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: j Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19913427. FEATURES Location/Qualifiers source 1..2858 /db_xref="H-InvDB:HIT000031428" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1797 IMAGE:3502278" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2858 /gene="ATP6V1B2" /gene_synonym="ATP6B1B2" /gene_synonym="HO57" /gene_synonym="VATB" /gene_synonym="Vma2" /db_xref="GeneID:526" /db_xref="HGNC:HGNC:854" /db_xref="MIM:606939" CDS 17..1552 /gene="ATP6V1B2" /gene_synonym="ATP6B1B2" /gene_synonym="HO57" /gene_synonym="VATB" /gene_synonym="Vma2" /codon_start=1 /product="ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2" /protein_id="AAH03100.1" /db_xref="GeneID:526" /db_xref="HGNC:HGNC:854" /db_xref="MIM:606939" /translation="MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPR LTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGT SGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINP QCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKD VVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATI YERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPI NVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLL YLEFLQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDS AKH" BASE COUNT 730 a 608 c 681 g 839 t ORIGIN 1 ggacagagga gacaagatgg cgctgcgggc gatgcggggg attgtcaacg gggccgcacc 61 cgagctaccc gtgcccaccg gtgggccggc ggtgggagct cgggagcagg cgctggcagt 121 cagtcggaac tacctctccc agcctcgcct cacatacaag acagtatctg gagtcaatgg 181 tccactagtg atcttagatc atgttaagtt tcccaggtat gctgaaattg tccatttgac 241 cttaccggat ggcacaaaga gaagtgggca agttctggaa gttagtggtt ccaaggcagt 301 agttcaggta tttgaaggga cttcaggtat agatgctaag aaaacgtcct gtgagtttac 361 tggggatatt ctccgaacac cggtgtctga ggatatgctt ggtcgggtat tcaatggatc 421 gggaaaaccc attgacagag gtcctgttgt actggccgaa gacttccttg atatcatggg 481 tcagccaatc aaccctcaat gtcgaatcta cccagaggaa atgattcaga ctggcatttc 541 ggccatcgat gggatgaaca gtattgctag ggggcagaaa attcctatct tctctgctgc 601 tgggctacca cacaatgaga ttgcagctca gatctgtcgc caggctggtt tggtaaagaa 661 atccaaagat gtagtagact acagtgagga aaattttgca attgtatttg ctgctatggg 721 tgtaaacatg gaaactgccc ggttcttcaa atctgacttt gaagaaaatg gctcaatgga 781 caatgtctgc ctctttttga acttggctaa tgacccaacc attgagcgaa ttatcactcc 841 tcgcctggct ctaaccacag ctgaatttct ggcgtaccaa tgtgagaaac atgtattggt 901 tattctaaca gacatgagtt cttatgctga agcacttcga gaggtttcag cagccaggga 961 agaggtacct ggtcgacgag gttttccagg ttacatgtat acagatttag ccacgatata 1021 tgaacgcgct gggcgagtgg aagggagaaa cggctcgatt actcaaatcc ctattctaac 1081 catgcctaat gatgatatca ctcaccccat cccagacttg actggctaca ttacagaggg 1141 gcagatctat gtggacagac agctgcacaa cagacagatt tatccaccta tcaatgtgct 1201 gccctcacta tcacggttaa tgaagtctgc tattggagaa gggatgacca ggaaggatca 1261 tgccgatgta tctaaccagc tatatgcgtg ctatgctatt ggaaaggatg tgcaagccat 1321 gaaagctgtc gttggagaag aagcccttac ctcagatgat cttctctact tggaatttct 1381 gcagaagttt gagaggaact tcattgctca gggtccttac gaaaatcgca ctgtctttga 1441 gactttggac attggctggc agctactccg aatcttcccc aaagaaatgc tgaagagaat 1501 ccctcagagc accctcagcg aattttaccc tcgagactct gcaaagcatt agctgctgct 1561 tctgcattgc tccgcgctct tgtgaaatac tggttctgtt ttctttattc cttttgcact 1621 ctcggttccc acctttgtgt tggagtttac catgttaccc tgtaattaaa aacaaagaat 1681 aggtaacata ttgtgccagt gttgcaacgt tttaaactgc taacagacct taaaatatcc 1741 ccctacctgg gtcctcagtg ctatgtttaa agtgctgcag ggatggagtg gcgttttctt 1801 attgctgtat gtattgtaca tagtggagta gttagttacc tgataacagt cttgttattt 1861 gggtctctta gaccttacct ctcaactccc tcaagagtac cagtctctga agttataatg 1921 ctttggtctc tacattaggg gcaagatcca gtctgagaga agtctccttt gagaagggcc 1981 aagaggctct ttcctgagtg tttgctttcg gtttgttggt atgcctgtat tgctgggctg 2041 tgctgctgct cgaagcagat ggttttgact gtctttttgc tctttcctat ataatgaata 2101 gatgagtgaa aggagttttc tttttctctt tagtacttac gtattgggat tcctgtgtct 2161 tacagctctc cctctccaaa taatacacag aatcctgcaa ctttttgcac agctggtatc 2221 tgtctggtag cagtgagacc ccttgtcttg gtgatcctta ctgggtttcc aagcagagga 2281 gtcacatgat tacaattgcc agtagagttg ttgtttgggg tacaagatga gaagaaagaa 2341 aaacctacag cctttctaca ttctgacatg ctaacagtgg tttaagtttc taaagtgttt 2401 accagatgct gaaggcaagg ggagggagca gaagcactta tgtttacgga tattttaaac 2461 tctgttagag agcagccttt gaaaatcccc aatttggttc tgctttttga cctctctcta 2521 ccttttcagg gtaatctttg tggcacaaac gatagcattt ccaagcttta gagttttctg 2581 aattcctgcg ccttcctgac gtgagccctg agcgatcttc tatgcagttc tgccatgcgt 2641 cctgttggtc tctctgtgtt ctttgttact tgggtgcaat agcaacttcc ctaccccgtg 2701 cattccatct ttcatgttgt gtaaagttct tcactttttt ctctgagggc tgggggttgg 2761 gggagtcagc atgattatat tttaatgtag aaaatgtgac atctggatat aaaatgaaaa 2821 taaatgttaa attaaatgga aaaaaaaaaa aaaaaaaa //