LOCUS BC003100 2858 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 56/58kDa, V1
subunit B2, mRNA (cDNA clone MGC:1797 IMAGE:3502278), complete cds.
ACCESSION BC003100
VERSION BC003100.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2858)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2858)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-FEB-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: j Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19913427.
FEATURES Location/Qualifiers
source 1..2858
/db_xref="H-InvDB:HIT000031428"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1797 IMAGE:3502278"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2858
/gene="ATP6V1B2"
/gene_synonym="ATP6B1B2"
/gene_synonym="HO57"
/gene_synonym="VATB"
/gene_synonym="Vma2"
/db_xref="GeneID:526"
/db_xref="HGNC:HGNC:854"
/db_xref="MIM:606939"
CDS 17..1552
/gene="ATP6V1B2"
/gene_synonym="ATP6B1B2"
/gene_synonym="HO57"
/gene_synonym="VATB"
/gene_synonym="Vma2"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 56/58kDa, V1
subunit B2"
/protein_id="AAH03100.1"
/db_xref="GeneID:526"
/db_xref="HGNC:HGNC:854"
/db_xref="MIM:606939"
/translation="MALRAMRGIVNGAAPELPVPTGGPAVGAREQALAVSRNYLSQPR
LTYKTVSGVNGPLVILDHVKFPRYAEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGT
SGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPIDRGPVVLAEDFLDIMGQPINP
QCRIYPEEMIQTGISAIDGMNSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKD
VVDYSEENFAIVFAAMGVNMETARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPR
LALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATI
YERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRQIYPPI
NVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAIGKDVQAMKAVVGEEALTSDDLL
YLEFLQKFERNFIAQGPYENRTVFETLDIGWQLLRIFPKEMLKRIPQSTLSEFYPRDS
AKH"
BASE COUNT 730 a 608 c 681 g 839 t
ORIGIN
1 ggacagagga gacaagatgg cgctgcgggc gatgcggggg attgtcaacg gggccgcacc
61 cgagctaccc gtgcccaccg gtgggccggc ggtgggagct cgggagcagg cgctggcagt
121 cagtcggaac tacctctccc agcctcgcct cacatacaag acagtatctg gagtcaatgg
181 tccactagtg atcttagatc atgttaagtt tcccaggtat gctgaaattg tccatttgac
241 cttaccggat ggcacaaaga gaagtgggca agttctggaa gttagtggtt ccaaggcagt
301 agttcaggta tttgaaggga cttcaggtat agatgctaag aaaacgtcct gtgagtttac
361 tggggatatt ctccgaacac cggtgtctga ggatatgctt ggtcgggtat tcaatggatc
421 gggaaaaccc attgacagag gtcctgttgt actggccgaa gacttccttg atatcatggg
481 tcagccaatc aaccctcaat gtcgaatcta cccagaggaa atgattcaga ctggcatttc
541 ggccatcgat gggatgaaca gtattgctag ggggcagaaa attcctatct tctctgctgc
601 tgggctacca cacaatgaga ttgcagctca gatctgtcgc caggctggtt tggtaaagaa
661 atccaaagat gtagtagact acagtgagga aaattttgca attgtatttg ctgctatggg
721 tgtaaacatg gaaactgccc ggttcttcaa atctgacttt gaagaaaatg gctcaatgga
781 caatgtctgc ctctttttga acttggctaa tgacccaacc attgagcgaa ttatcactcc
841 tcgcctggct ctaaccacag ctgaatttct ggcgtaccaa tgtgagaaac atgtattggt
901 tattctaaca gacatgagtt cttatgctga agcacttcga gaggtttcag cagccaggga
961 agaggtacct ggtcgacgag gttttccagg ttacatgtat acagatttag ccacgatata
1021 tgaacgcgct gggcgagtgg aagggagaaa cggctcgatt actcaaatcc ctattctaac
1081 catgcctaat gatgatatca ctcaccccat cccagacttg actggctaca ttacagaggg
1141 gcagatctat gtggacagac agctgcacaa cagacagatt tatccaccta tcaatgtgct
1201 gccctcacta tcacggttaa tgaagtctgc tattggagaa gggatgacca ggaaggatca
1261 tgccgatgta tctaaccagc tatatgcgtg ctatgctatt ggaaaggatg tgcaagccat
1321 gaaagctgtc gttggagaag aagcccttac ctcagatgat cttctctact tggaatttct
1381 gcagaagttt gagaggaact tcattgctca gggtccttac gaaaatcgca ctgtctttga
1441 gactttggac attggctggc agctactccg aatcttcccc aaagaaatgc tgaagagaat
1501 ccctcagagc accctcagcg aattttaccc tcgagactct gcaaagcatt agctgctgct
1561 tctgcattgc tccgcgctct tgtgaaatac tggttctgtt ttctttattc cttttgcact
1621 ctcggttccc acctttgtgt tggagtttac catgttaccc tgtaattaaa aacaaagaat
1681 aggtaacata ttgtgccagt gttgcaacgt tttaaactgc taacagacct taaaatatcc
1741 ccctacctgg gtcctcagtg ctatgtttaa agtgctgcag ggatggagtg gcgttttctt
1801 attgctgtat gtattgtaca tagtggagta gttagttacc tgataacagt cttgttattt
1861 gggtctctta gaccttacct ctcaactccc tcaagagtac cagtctctga agttataatg
1921 ctttggtctc tacattaggg gcaagatcca gtctgagaga agtctccttt gagaagggcc
1981 aagaggctct ttcctgagtg tttgctttcg gtttgttggt atgcctgtat tgctgggctg
2041 tgctgctgct cgaagcagat ggttttgact gtctttttgc tctttcctat ataatgaata
2101 gatgagtgaa aggagttttc tttttctctt tagtacttac gtattgggat tcctgtgtct
2161 tacagctctc cctctccaaa taatacacag aatcctgcaa ctttttgcac agctggtatc
2221 tgtctggtag cagtgagacc ccttgtcttg gtgatcctta ctgggtttcc aagcagagga
2281 gtcacatgat tacaattgcc agtagagttg ttgtttgggg tacaagatga gaagaaagaa
2341 aaacctacag cctttctaca ttctgacatg ctaacagtgg tttaagtttc taaagtgttt
2401 accagatgct gaaggcaagg ggagggagca gaagcactta tgtttacgga tattttaaac
2461 tctgttagag agcagccttt gaaaatcccc aatttggttc tgctttttga cctctctcta
2521 ccttttcagg gtaatctttg tggcacaaac gatagcattt ccaagcttta gagttttctg
2581 aattcctgcg ccttcctgac gtgagccctg agcgatcttc tatgcagttc tgccatgcgt
2641 cctgttggtc tctctgtgtt ctttgttact tgggtgcaat agcaacttcc ctaccccgtg
2701 cattccatct ttcatgttgt gtaaagttct tcactttttt ctctgagggc tgggggttgg
2761 gggagtcagc atgattatat tttaatgtag aaaatgtgac atctggatat aaaatgaaaa
2821 taaatgttaa attaaatgga aaaaaaaaaa aaaaaaaa
//