LOCUS BC002699 1654 bp mRNA linear HUM 22-SEP-2005 DEFINITION Homo sapiens ATG5 autophagy related 5 homolog (S. cerevisiae), mRNA (cDNA clone MGC:3622 IMAGE:3609927), complete cds. ACCESSION BC002699 VERSION BC002699.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1654) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1654) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC002699.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 12 Row: o Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4757797. FEATURES Location/Qualifiers source 1..1654 /db_xref="H-InvDB:HIT000031108" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3622 IMAGE:3609927" /tissue_type="Uterus, endometrium adenocarcinoma" /clone_lib="NIH_MGC_44" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1654 /gene="ATG5" /gene_synonym="APG5" /gene_synonym="ASP" /gene_synonym="hAPG5" /db_xref="GeneID:9474" /db_xref="MIM:604261" CDS 200..1027 /gene="ATG5" /gene_synonym="APG5" /gene_synonym="ASP" /gene_synonym="hAPG5" /codon_start=1 /product="ATG5 protein" /protein_id="AAH02699.1" /db_xref="GeneID:9474" /db_xref="MIM:604261" /translation="MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSY LTLVTDKVKKHFQKVMRQEDISEIWFEYEGTPLKWHYPIGLLFDLLASSSALPWNITV HFKSFPEKDLLHCPSKDAIEAHFMSCMKEADALKHKSQVINEMQKKDHKQLWMGLQND RFDQFWAINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDL LKEVCPSAIDPEDGEKKNQVMIHGIEPMLETPLQWLSEHLSYPDNFLHISIIPQPTD" BASE COUNT 520 a 306 c 362 g 466 t ORIGIN 1 cccgcccggc cgcgatggcg ggtgaaggtg gttcctccgg gcaaggtgga gttggcgaga 61 cgccggcccg gagccctggg gccggttggc gggtgtggcc tgcggggtcc ctcttggggt 121 acatgtctgt tgcttactaa gtttggcttt ggttgaaata agaatttagc ctgtatgtac 181 tgctttaact cctggaagaa tgacagatga caaagatgtg cttcgagatg tgtggtttgg 241 acgaattcca acttgtttca cgctatatca ggatgagata actgaaaggg aagcagaacc 301 atactatttg cttttgccaa gagtaagtta tttgacgttg gtaactgaca aagtgaaaaa 361 gcactttcag aaggttatga gacaagaaga cattagtgag atatggtttg aatatgaagg 421 cacaccactg aaatggcatt atccaattgg tttgctattt gatcttcttg catcaagttc 481 agctcttcct tggaacatca cagtacattt taagagtttt ccagaaaaag accttctgca 541 ctgtccatct aaggatgcaa ttgaagctca ttttatgtca tgtatgaaag aagctgatgc 601 tttaaaacat aaaagtcaag taatcaatga aatgcagaaa aaagatcaca agcaactctg 661 gatgggattg caaaatgaca gatttgacca gttttgggcc atcaatcgga aactcatgga 721 atatcctgca gaagaaaatg gatttcgtta tatccccttt agaatatatc agacaacgac 781 tgaaagacct ttcattcaga agctgtttcg tcctgtggct gcagatggac agttgcacac 841 actaggagat ctcctcaaag aagtttgtcc ttctgctatt gatcctgaag atggggaaaa 901 aaagaatcaa gtgatgattc atggaattga gccaatgttg gaaacacctc tgcagtggct 961 gagtgaacat ctgagctacc cggataattt tcttcatatt agtatcatcc cacagccaac 1021 agattgaagg atcaactatt tgcctgaaca gaatcatcct taaatgggat ttatcagagc 1081 atgtcaccct tttgcttcaa tcaggtttgg tggaggcaac ctgaccagaa acacttcgct 1141 gctgcaagcc agacaggaaa aagattccat gtcagataag gcaactgggc tggtcttact 1201 ttgcatcacc tctgctttcc tccactgcca tcattaaacc tcagctgtga catgaaagac 1261 ttaccggacc actgaaggtc ttctgtaaaa tataatgaag ctgaaacctt tggcctaaga 1321 agaaaatgga agtatgtgcc actcgatttg tatttctgat taacaaataa acaggggtat 1381 ttcctaaggt gaccatggtt gaactttagc tcatgaaagt ggaaacattg gtttaatttt 1441 caagagaatt aagaaagtaa aagagaaatt ctgttatcaa taacttgcaa gtaatttttt 1501 gtaaaagatt gaattacagt aaacccatct ttccttaacg aaaatttcct atgtttacag 1561 tctgtctatt ggtatgcaat cttgtaactt tgataatgaa cagtgagaga tttttaaata 1621 aagcctctaa atatgaaaaa aaaaaaaaaa aaaa //