LOCUS       BC002552                1376 bp    mRNA    linear   HUM 04-OCT-2003
DEFINITION  Homo sapiens high-mobility group 20B, mRNA (cDNA clone MGC:1965
            IMAGE:3138919), complete cds.
ACCESSION   BC002552
VERSION     BC002552.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1376)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-FEB-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC002552.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 4 Row: j Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5454079.
FEATURES             Location/Qualifiers
     source          1..1376
                     /db_xref="H-InvDB:HIT000030985"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:1965 IMAGE:3138919"
                     /tissue_type="Placenta, choriocarcinoma"
                     /clone_lib="NIH_MGC_21"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1376
                     /gene="HMG20B"
                     /gene_synonym="BRAF25"
                     /gene_synonym="BRAF35"
                     /gene_synonym="HMGX2"
                     /gene_synonym="SMARCE1r"
                     /gene_synonym="SOXL"
                     /db_xref="GeneID:10362"
                     /db_xref="MIM:605535"
     CDS             59..1012
                     /gene="HMG20B"
                     /gene_synonym="BRAF25"
                     /gene_synonym="BRAF35"
                     /gene_synonym="HMGX2"
                     /gene_synonym="SMARCE1r"
                     /gene_synonym="SOXL"
                     /codon_start=1
                     /product="HMG20B protein"
                     /protein_id="AAH02552.1"
                     /db_xref="GeneID:10362"
                     /db_xref="MIM:605535"
                     /translation="MSHGPKQPGAAAAPAGGKAPGQHGGFVVTVKQERGEGPRAGEKG
                     SHEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITK
                     MLGAEWSKLQPTEKQRYLDEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDS
                     SSGLMNTLLNGHKGGDCDGFSTFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNA
                     VLQRHTQSMSSARERLEQELALEERRTLALQQQLQAVRQALTASFASLPVPGTGETPT
                     LGTLDFYMARLHGAIERDPAQHEKLIVRIKEILAQVASEHL"
     misc_feature    266..469
                     /gene="HMG20B"
                     /gene_synonym="BRAF25"
                     /gene_synonym="BRAF35"
                     /gene_synonym="HMGX2"
                     /gene_synonym="SMARCE1r"
                     /gene_synonym="SOXL"
                     /note="HMG_box; Region: HMG (high mobility group) box"
                     /db_xref="CDD:pfam00505"
BASE COUNT          323 a          412 c          441 g          200 t
ORIGIN      
        1 gcgtcgcgca gtcgggaggt ccgggaaagt ttctttggag gtccggcccg gagcggccat
       61 gtcccacggc cccaagcagc ccggcgcggc cgccgcgccg gcgggcggca aggctccggg
      121 ccagcatggg ggcttcgtgg tgactgtcaa gcaagagcgc ggcgagggtc cacgcgcggg
      181 cgagaagggg tcccacgagg aggagccggt gaagaaacgc ggctggccca agggcaagaa
      241 gcggaagaag attctgccga atgggcccaa ggcaccggtc acgggctacg tgcgcttcct
      301 gaacgagcgg cgcgagcaga tccgcacgcg ccacccggat ctgccctttc ccgagatcac
      361 caagatgctg ggcgccgagt ggagcaagct gcagccaacg gaaaagcagc ggtacctgga
      421 tgaggccgag agagagaagc agcagtacat gaaggagctg cgggcgtacc agcagtctga
      481 agcctataag atgtgcacgg agaagatcca ggagaagaag atcaagaaag aagactcgag
      541 ctctgggctc atgaacactc tcctgaatgg acacaagggt ggggactgcg atggcttctc
      601 caccttcgat gttcccatct tcactgaaga gttcttggac caaaacaaag cgcgtgaggc
      661 ggagcttcgg cgcttgcgga agatgaatgt ggccttcgag gagcagaacg cggtactgca
      721 gaggcacacg cagagcatga gcagcgcgcg cgagcgtctg gagcaggagc tggcgctgga
      781 ggagcggagg acgctggcgc tgcagcagca gctccaggcc gtgcgccagg cgctcaccgc
      841 cagcttcgcc tcactgccgg tgccgggcac gggcgaaacg cccacgctgg gcactctgga
      901 cttctacatg gcccggcttc acggagccat cgagcgcgac cccgcccagc acgagaagct
      961 catcgtccgc atcaaggaaa tcctggccca ggtcgccagc gagcacctgt gaggagtggg
     1021 cgggcccacg atgcagagga gaagctgtgg gcgcggccct gccacacccc accccgtgga
     1081 cgagaggctg ggggtccacc ctttggggcc tggtcccatc ctgcaccttg ggggctccag
     1141 cccccctaaa attaaatttc tgcagcatcc ctttagcttt caatctcccc agccccctga
     1201 acccggaaaa agcactcgct gcgcgataca cccagaagaa cctcacagcc gagggtgccc
     1261 ctcctcggag gacagccacg cgctacactg gctccttctc actgctggat ccggactttt
     1321 taaataaaaa caagtaaaat ttgtgtttta aaaaaaaaaa aaaaaaaaaa aaaaaa
//