LOCUS BC002439 1438 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens HIV-1 Tat interactive protein 2, 30kDa, mRNA (cDNA clone MGC:1318 IMAGE:3346984), complete cds. ACCESSION BC002439 VERSION BC002439.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1438) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1438) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC002439.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: i Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147574. FEATURES Location/Qualifiers source 1..1438 /db_xref="H-InvDB:HIT000030893" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1318 IMAGE:3346984" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1438 /gene="HTATIP2" /gene_synonym="CC3" /gene_synonym="TIP30" /db_xref="GeneID:10553" /db_xref="HGNC:HGNC:16637" /db_xref="MIM:605628" CDS 11..841 /gene="HTATIP2" /gene_synonym="CC3" /gene_synonym="TIP30" /codon_start=1 /product="HIV-1 Tat interactive protein 2, 30kDa" /protein_id="AAH02439.2" /db_xref="GeneID:10553" /db_xref="HGNC:HGNC:16637" /db_xref="MIM:605628" /translation="MAGPAALSAAAAAALAAALLLLRREDPGPGAGPSMAETEALSKL REDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQE VVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKH FNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLV RKFFGSLPDSWARGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGKAHGSLKP " BASE COUNT 398 a 293 c 370 g 377 t ORIGIN 1 ggatgctctg atggccgggc ctgcggcgct gagcgcggcg gcggcggctg ctctggcggc 61 cgccctgctc ctgctgcgtc gtgaggaccc ggggccgggg gctggcccca gcatggccga 121 aacagaagcc ctgtcgaagc ttcgggaaga cttcaggatg cagaataaat ccgtctttat 181 tttgggcgcc agcggagaaa ccggcagagt gctcttaaag gaaatcctgg agcagggcct 241 gttttccaaa gtcacgctca ttggccggag gaagctcacc ttcgacgagg aagcttataa 301 aaatgtgaat caagaagtgg tggactttga aaagttggat gactacgcct ctgcctttca 361 aggtcatgat gttggattct gttgcctggg taccaccaga gggaaagctg gggcggaggg 421 atttgttcgt gttgaccgag attatgtgct gaagtctgca gagctggcaa aagctggagg 481 gtgcaaacat ttcaacttgc tatcctctaa aggagctgat aaatcaagca attttttata 541 tctacaagtt aagggagaag tagaagccaa ggttgaagaa ttaaaatttg atcgttactc 601 tgtatttagg cctggagttc tgttatgtga taggcaagaa tctcgcccag gtgaatggct 661 ggttagaaag ttctttggct ccttaccaga ctcttgggcc agggggcatt ctgtgcctgt 721 ggtgaccgtg gttagagcaa tgctgaacaa tgtggtgaga ccaagagaca agcagatgga 781 actgctggag aacaaggcca tccatgacct ggggaaagcg catggctctc tcaagccatg 841 accacactgg agaaatggtt tttattgtca accttaacac ccatcaccaa atcggtaatt 901 tcagggtcta aaaaaagtca gcatgtttta actttgttgt tttactatcc tcaggcatcc 961 attccaatca agaaatgatg gtgctctgca tcagtggttc agagcctggt tatacatata 1021 gatcactcag ggagctttgg aaaaataaag atttgtcagc cctatctcaa acttgaatca 1081 aaatttctgg ggtgtgggca caataatctg taattttctt tgtttatact tcccctgatg 1141 ccactggttc cgatgccact ggctgggggg cctgctttga aatgcttgtc tgcagagtca 1201 cagcagccat gaaaacctta tgaccgtgca aatgagctct gctctaaaat tgttgacatt 1261 catgtctctg agttacaaaa gtgctaattc actacatgta attgtgtaag taaacattgt 1321 gcctttacta cttctttatg taatagaagt tatataccta agcttatata atacatgggg 1381 aggattaaat aaaggaataa agatgaatgg acaactccaa aaaaaaaaaa aaaaaaaa //