LOCUS BC001940 2461 bp mRNA linear HUM 17-DEC-2007 DEFINITION Homo sapiens Holliday junction recognition protein, mRNA (cDNA clone MGC:4103 IMAGE:2820741), complete cds. ACCESSION BC001940 VERSION BC001940.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2461) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2461) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 9 Row: e Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361746. FEATURES Location/Qualifiers source 1..2461 /db_xref="H-InvDB:HIT000030767" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:4103 IMAGE:2820741" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2461 /gene="HJURP" /gene_synonym="DKFZp762E1312" /gene_synonym="fakts" /gene_synonym="hFLEG1" /gene_synonym="URLC9" /db_xref="GeneID:55355" /db_xref="HGNC:HGNC:25444" CDS 1..2247 /gene="HJURP" /gene_synonym="DKFZp762E1312" /gene_synonym="fakts" /gene_synonym="hFLEG1" /gene_synonym="URLC9" /codon_start=1 /product="Holliday junction recognition protein" /protein_id="AAH01940.2" /db_xref="GeneID:55355" /db_xref="HGNC:HGNC:25444" /translation="MLGTLRAMEGEDVEDDQLLQKLRASRRRFQRRMQRLIEKYNQPF EDTPVVQMATLTYETPQGLRIWGGRLIKERNKGEIQDSSMKPADRTDGSVQAAAWGPE LPSHRTVLGADSKSGEVDATSDQEESVAWALAPAVPQSPLKNELRRKYLTQVDILLQG AEYFECAGNRAGRDVRVTPLPSLASPAVPAPGYCSRISGKSPGDPAKPASSPREWDPL HPSSTDMALVPRNDSLSLQETSSSSFLSSQPFEDDDICNVTISDLYAGMLHSMSRLLS TKPSSIISTKTFIMQNWNCRRRHRYKSRMNKTYCKGARRSQRSSKENFIPCSEPVKGT GALRDCKNVLDVSCRKTGLKLEKAFLEVNRPQIHKLDPSWKERKVTPSKYSSLIYFDS SATYNLDEENRFRTLKWLISPVKIVSRPTIRQGHGENRQREIEIRFDQLHREYCLSPR NQPRRMCLPDSWAMNMYRGGPASPGGLQGLETRRLSLPSSKAKAKSLSEAFENLGKRS LEAGRCLPKSDSSSSLPKTNPTHSATRPQQTSDLHVQGNSSGIFRKSVSPSKTLSVPD KEVPGHGRNRYDEIKEEFDKLHQKYCLKSPGQMTVPLCIGVSTDKASMEVRYQTEGFL GKLNPDPHFQGFQKLPSSPLGCRKSLLGSTAIEAPSSTCVARAITRDGTRDHQFPAKR PRLSEPQGSGRQGNSLGASDGVDNTVRPGDQGSSSQPNSEERGENTSYRMEEKSDFML EKLETKSV" BASE COUNT 724 a 581 c 613 g 543 t ORIGIN 1 atgctgggta cgctgcgcgc catggagggc gaggacgtgg aagacgacca gctgctgcag 61 aagctcaggg ccagtcgccg ccgcttccag aggcgcatgc agcggctgat agagaagtac 121 aaccagccct tcgaggacac cccggtggtg caaatggcca cgctgaccta cgagacgcca 181 cagggattga gaatttgggg tggaagacta ataaaggaaa gaaacaaagg agagatccag 241 gactcctcca tgaagcccgc ggacaggaca gatggctccg tgcaagctgc agcctggggt 301 cctgagcttc cctcgcaccg cacagtcctg ggagccgatt caaaaagcgg tgaggtcgat 361 gccacgtcag accaggaaga gtcagttgct tgggccttag cacctgcagt gcctcaaagc 421 cctttgaaaa atgaattaag aaggaaatac ttgacccaag tggatatact gctacaaggt 481 gcagagtatt ttgagtgtgc aggtaacaga gctggaaggg atgtacgtgt gactccgctg 541 ccttcactgg cctcacctgc cgtgcctgcc cccggatact gcagtcgtat ctccggaaag 601 agtcctggtg acccagcgaa accagcttca tctcccagag aatgggatcc tttgcatcct 661 tcctccacag acatggcctt agtacctaga aatgacagcc tctccctaca agagaccagt 721 agcagcagct tcttaagcag ccagcccttt gaagatgatg acatttgcaa tgtgaccatc 781 agtgacctgt acgcagggat gctgcactcc atgagccggc tgttgagcac aaagccatca 841 agcatcatct ccaccaaaac gttcatcatg caaaactgga actgcaggag gaggcacaga 901 tataagagca ggatgaacaa aacatattgc aaaggagcca gacgttctca gaggagctcc 961 aaggagaact tcataccctg ctctgagcct gtgaaaggga caggggcatt aagagattgc 1021 aagaacgtat tagatgtttc ttgccgtaag acaggtttaa aattggaaaa agcttttctt 1081 gaagtcaaca gaccccaaat ccataagtta gatccaagtt ggaaggagcg caaagtgaca 1141 ccctcgaagt attcttcctt gatttacttc gactccagtg caacatataa tcttgatgag 1201 gaaaatagat ttaggacatt aaaatggtta atttctcctg taaaaatagt ttccagacca 1261 acaatacgac agggccatgg agagaaccgt cagagggaga ttgaaatccg atttgatcag 1321 cttcatcggg aatattgcct gagtcccagg aaccagcctc gccggatgtg cctcccggac 1381 tcctgggcca tgaacatgta cagagggggt cctgcgagtc ctggtggcct tcagggctta 1441 gaaacccgca ggctgagttt accttccagc aaagcaaaag caaaaagttt aagtgaggct 1501 tttgaaaacc taggcaaaag atctctggaa gcaggtaggt gcctgcccaa gagcgattca 1561 tcttcatcac ttccaaagac caaccccaca cacagcgcaa ctcgcccgca gcagacatct 1621 gaccttcacg ttcagggaaa tagttctgga atatttagaa agtcagtgtc acccagcaaa 1681 actctttcag tcccagataa agaagtgcca ggccacggaa ggaatcgtta cgatgaaatt 1741 aaagaagaat ttgacaagct tcatcaaaag tattgcctca aatctcctgg gcagatgaca 1801 gtgcctttat gtattggagt gtctacagat aaagcaagta tggaagttcg atatcaaaca 1861 gaaggcttct taggaaaatt aaatccagac cctcacttcc agggtttcca gaagttgcca 1921 tcatcacccc tggggtgcag aaaaagtcta ctgggctcaa ctgcaattga ggctccttca 1981 tctacatgtg ttgctcgtgc catcacgagg gatggcacga gggaccatca gttccctgca 2041 aaaagaccca ggctatcaga accccagggc tccggacgcc agggcaattc cctgggtgcc 2101 tcagatgggg tggacaacac cgtcagaccg ggagaccagg gcagctcttc acagcccaac 2161 tcagaagaga gaggagagaa cacgtcttac aggatggaag agaaaagtga tttcatgcta 2221 gaaaaattgg aaactaaaag tgtgtagcta ggttatttcg gagtgttatt tatcttccca 2281 cttgctctct gtttgtattt ttgttttgtt tttgattctt gagactgtga ggacttggtt 2341 gacttctctg cccttaaagt aaatattagt gaaattggtt ccatcagaga taacctcgag 2401 ttcttggtgt agaaattatg tgaataaagt tgctcaatta gaaaaaaaaa aaaaaaaaaa 2461 a //