LOCUS BC001940 2461 bp mRNA linear HUM 17-DEC-2007
DEFINITION Homo sapiens Holliday junction recognition protein, mRNA (cDNA
clone MGC:4103 IMAGE:2820741), complete cds.
ACCESSION BC001940
VERSION BC001940.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2461)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2461)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 9 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361746.
FEATURES Location/Qualifiers
source 1..2461
/db_xref="H-InvDB:HIT000030767"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4103 IMAGE:2820741"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2461
/gene="HJURP"
/gene_synonym="DKFZp762E1312"
/gene_synonym="fakts"
/gene_synonym="hFLEG1"
/gene_synonym="URLC9"
/db_xref="GeneID:55355"
/db_xref="HGNC:HGNC:25444"
CDS 1..2247
/gene="HJURP"
/gene_synonym="DKFZp762E1312"
/gene_synonym="fakts"
/gene_synonym="hFLEG1"
/gene_synonym="URLC9"
/codon_start=1
/product="Holliday junction recognition protein"
/protein_id="AAH01940.2"
/db_xref="GeneID:55355"
/db_xref="HGNC:HGNC:25444"
/translation="MLGTLRAMEGEDVEDDQLLQKLRASRRRFQRRMQRLIEKYNQPF
EDTPVVQMATLTYETPQGLRIWGGRLIKERNKGEIQDSSMKPADRTDGSVQAAAWGPE
LPSHRTVLGADSKSGEVDATSDQEESVAWALAPAVPQSPLKNELRRKYLTQVDILLQG
AEYFECAGNRAGRDVRVTPLPSLASPAVPAPGYCSRISGKSPGDPAKPASSPREWDPL
HPSSTDMALVPRNDSLSLQETSSSSFLSSQPFEDDDICNVTISDLYAGMLHSMSRLLS
TKPSSIISTKTFIMQNWNCRRRHRYKSRMNKTYCKGARRSQRSSKENFIPCSEPVKGT
GALRDCKNVLDVSCRKTGLKLEKAFLEVNRPQIHKLDPSWKERKVTPSKYSSLIYFDS
SATYNLDEENRFRTLKWLISPVKIVSRPTIRQGHGENRQREIEIRFDQLHREYCLSPR
NQPRRMCLPDSWAMNMYRGGPASPGGLQGLETRRLSLPSSKAKAKSLSEAFENLGKRS
LEAGRCLPKSDSSSSLPKTNPTHSATRPQQTSDLHVQGNSSGIFRKSVSPSKTLSVPD
KEVPGHGRNRYDEIKEEFDKLHQKYCLKSPGQMTVPLCIGVSTDKASMEVRYQTEGFL
GKLNPDPHFQGFQKLPSSPLGCRKSLLGSTAIEAPSSTCVARAITRDGTRDHQFPAKR
PRLSEPQGSGRQGNSLGASDGVDNTVRPGDQGSSSQPNSEERGENTSYRMEEKSDFML
EKLETKSV"
BASE COUNT 724 a 581 c 613 g 543 t
ORIGIN
1 atgctgggta cgctgcgcgc catggagggc gaggacgtgg aagacgacca gctgctgcag
61 aagctcaggg ccagtcgccg ccgcttccag aggcgcatgc agcggctgat agagaagtac
121 aaccagccct tcgaggacac cccggtggtg caaatggcca cgctgaccta cgagacgcca
181 cagggattga gaatttgggg tggaagacta ataaaggaaa gaaacaaagg agagatccag
241 gactcctcca tgaagcccgc ggacaggaca gatggctccg tgcaagctgc agcctggggt
301 cctgagcttc cctcgcaccg cacagtcctg ggagccgatt caaaaagcgg tgaggtcgat
361 gccacgtcag accaggaaga gtcagttgct tgggccttag cacctgcagt gcctcaaagc
421 cctttgaaaa atgaattaag aaggaaatac ttgacccaag tggatatact gctacaaggt
481 gcagagtatt ttgagtgtgc aggtaacaga gctggaaggg atgtacgtgt gactccgctg
541 ccttcactgg cctcacctgc cgtgcctgcc cccggatact gcagtcgtat ctccggaaag
601 agtcctggtg acccagcgaa accagcttca tctcccagag aatgggatcc tttgcatcct
661 tcctccacag acatggcctt agtacctaga aatgacagcc tctccctaca agagaccagt
721 agcagcagct tcttaagcag ccagcccttt gaagatgatg acatttgcaa tgtgaccatc
781 agtgacctgt acgcagggat gctgcactcc atgagccggc tgttgagcac aaagccatca
841 agcatcatct ccaccaaaac gttcatcatg caaaactgga actgcaggag gaggcacaga
901 tataagagca ggatgaacaa aacatattgc aaaggagcca gacgttctca gaggagctcc
961 aaggagaact tcataccctg ctctgagcct gtgaaaggga caggggcatt aagagattgc
1021 aagaacgtat tagatgtttc ttgccgtaag acaggtttaa aattggaaaa agcttttctt
1081 gaagtcaaca gaccccaaat ccataagtta gatccaagtt ggaaggagcg caaagtgaca
1141 ccctcgaagt attcttcctt gatttacttc gactccagtg caacatataa tcttgatgag
1201 gaaaatagat ttaggacatt aaaatggtta atttctcctg taaaaatagt ttccagacca
1261 acaatacgac agggccatgg agagaaccgt cagagggaga ttgaaatccg atttgatcag
1321 cttcatcggg aatattgcct gagtcccagg aaccagcctc gccggatgtg cctcccggac
1381 tcctgggcca tgaacatgta cagagggggt cctgcgagtc ctggtggcct tcagggctta
1441 gaaacccgca ggctgagttt accttccagc aaagcaaaag caaaaagttt aagtgaggct
1501 tttgaaaacc taggcaaaag atctctggaa gcaggtaggt gcctgcccaa gagcgattca
1561 tcttcatcac ttccaaagac caaccccaca cacagcgcaa ctcgcccgca gcagacatct
1621 gaccttcacg ttcagggaaa tagttctgga atatttagaa agtcagtgtc acccagcaaa
1681 actctttcag tcccagataa agaagtgcca ggccacggaa ggaatcgtta cgatgaaatt
1741 aaagaagaat ttgacaagct tcatcaaaag tattgcctca aatctcctgg gcagatgaca
1801 gtgcctttat gtattggagt gtctacagat aaagcaagta tggaagttcg atatcaaaca
1861 gaaggcttct taggaaaatt aaatccagac cctcacttcc agggtttcca gaagttgcca
1921 tcatcacccc tggggtgcag aaaaagtcta ctgggctcaa ctgcaattga ggctccttca
1981 tctacatgtg ttgctcgtgc catcacgagg gatggcacga gggaccatca gttccctgca
2041 aaaagaccca ggctatcaga accccagggc tccggacgcc agggcaattc cctgggtgcc
2101 tcagatgggg tggacaacac cgtcagaccg ggagaccagg gcagctcttc acagcccaac
2161 tcagaagaga gaggagagaa cacgtcttac aggatggaag agaaaagtga tttcatgcta
2221 gaaaaattgg aaactaaaag tgtgtagcta ggttatttcg gagtgttatt tatcttccca
2281 cttgctctct gtttgtattt ttgttttgtt tttgattctt gagactgtga ggacttggtt
2341 gacttctctg cccttaaagt aaatattagt gaaattggtt ccatcagaga taacctcgag
2401 ttcttggtgt agaaattatg tgaataaagt tgctcaatta gaaaaaaaaa aaaaaaaaaa
2461 a
//