LOCUS BC001817 1485 bp mRNA linear HUM 04-NOV-2003 DEFINITION Homo sapiens acyl-Coenzyme A dehydrogenase family, member 9, mRNA (cDNA clone IMAGE:3530094), partial cds. ACCESSION BC001817 VERSION BC001817.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1485) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1485) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (29-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 28, 2003 this sequence version replaced BC001817.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 11 Row: k Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361496. FEATURES Location/Qualifiers source 1..1485 /db_xref="H-InvDB:HIT000030669" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3530094" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1485 /gene="ACAD9" /gene_synonym="ACAD-9" /gene_synonym="MGC14452" /gene_synonym="NPD002" /db_xref="GeneID:28976" CDS <1..1032 /gene="ACAD9" /gene_synonym="ACAD-9" /gene_synonym="MGC14452" /gene_synonym="NPD002" /codon_start=1 /product="ACAD9 protein" /protein_id="AAH01817.2" /db_xref="GeneID:28976" /translation="KIPVENILGEVGDGFKVAMNILNSGRFSMGSVVAGLLKRLIEMT AEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAGMLDQPGFPDCSIEAA MVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTRILLIFEGTNEILRMYIAL TGLQHAGRILTTRIHELKQAKVSTVMDTVGRRLRDSLGRTVDLGLTGNHGVVHPSLAD SANKFEENTYCFGRTVETLLLRFGKTIMEEQLVLKRVANILINLYGMTAVLSRASRSI RIGLRNHDHEVLLANTFCVEAYLQNLFSLSQLDKYAPENLDEQIKKVSQQILEKRAYI CAHPLDRTC" misc_feature 34..477 /gene="ACAD9" /gene_synonym="ACAD-9" /gene_synonym="MGC14452" /gene_synonym="NPD002" /note="Acyl-CoA_dh; Region: Acyl-CoA dehydrogenase, C-terminal domain. C-terminal domain of Acyl-CoA dehydrogenase is an all-alpha, four helical up-and-down bundle" /db_xref="CDD:pfam00441" BASE COUNT 368 a 384 c 417 g 316 t ORIGIN 1 aagatacctg tggaaaacat ccttggagag gtcggagatg ggtttaaggt ggccatgaac 61 atcctcaaca gcggccggtt cagcatgggc agcgtcgtgg ctgggctgct caagagattg 121 attgaaatga ctgctgagta cgcctgcaca aggaaacagt ttaacaagag gctcagtgaa 181 tttggattga ttcaggagaa atttgcactg atggctcaga aggcttacgt catggagagt 241 atgacctacc tcacagcagg gatgctggac caacctggct ttcccgactg ctccatcgag 301 gcagccatgg tgaaggtgtt cagctccgag gccgcctggc agtgtgtgag tgaggcgctg 361 cagatcctcg ggggcttggg ctacacaagg gactatccgt acgagcgcat actgcgtgac 421 acccgcatcc tcctcatctt cgagggaacc aatgagattc tccggatgta catcgccctg 481 acgggtctgc agcatgccgg ccgcatcctg actaccagga tccatgagct taaacaggcc 541 aaagtgagca cagtcatgga taccgttggc cggaggcttc gggactccct gggccgaact 601 gtggacctgg ggctgacagg caaccatgga gttgtgcacc ccagtcttgc ggacagtgcc 661 aacaagtttg aggagaacac ctactgcttc ggccggaccg tggagacact gctgctccgc 721 tttggcaaga ccatcatgga ggagcagctg gtactgaagc gggtggccaa catcctcatc 781 aacctgtatg gcatgacggc cgtgctgtcg cgggccagcc gctccatccg cattgggctc 841 cgcaaccacg accacgaggt tctcttggcc aacaccttct gcgtggaagc ttacttgcag 901 aatctcttca gcctctctca gctggacaag tatgctccag aaaacctaga tgagcagatt 961 aagaaagtgt cccagcagat ccttgagaag cgagcctata tctgtgccca ccctctggac 1021 aggacatgct gaggcagggg acagtgtccc ctgctaccgc ccgcccctac ccatggcccg 1081 ttgctggatg actgttactc ttttttcaga aggtgttggg attatcacag gttaagcctt 1141 ttgttccccg tctgcacctg aagggttgtc gcctggcctg ggagagcctc ttccaggttt 1201 tgacctgcag gcagtgctct ctaacaggac catcacagct tctgaactga gccggagaga 1261 gagaatggaa ttgctgaccc ctggaactgg cgggtattct ggtcattgag gagacaccat 1321 agtggaaact ggggcttatg ctgctgcctc cagggtgtga ggtgggtggg gacctgtgtc 1381 aggtgtggat agccatttct gctcaaccac acattctcta agaaacagct tgaaagctca 1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //