LOCUS BC001777 1440 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens hippocalcin, mRNA (cDNA clone MGC:1822 IMAGE:3355354), complete cds. ACCESSION BC001777 VERSION BC001777.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1440) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1440) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: p Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19913445. FEATURES Location/Qualifiers source 1..1440 /db_xref="H-InvDB:HIT000030642" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1822 IMAGE:3355354" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1440 /gene="HPCA" /gene_synonym="BDR2" /db_xref="GeneID:3208" /db_xref="HGNC:HGNC:5144" /db_xref="MIM:142622" CDS 41..622 /gene="HPCA" /gene_synonym="BDR2" /codon_start=1 /product="hippocalcin" /protein_id="AAH01777.1" /db_xref="GeneID:3208" /db_xref="HGNC:HGNC:5144" /db_xref="MIM:142622" /translation="MGKQNSKLRPEMLQDLRENTEFSELELQEWYKGFLKDCPTGILN VDEFKKIYANFFPYGDASKFAEHVFRTFDTNSDGTIDFREFIIALSVTSRGRLEQKLM WAFSMYDLDGNGYISREEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNN DGKLSLEEFIRGAKSDPSIVRLLQCDPSSASQF" BASE COUNT 334 a 444 c 391 g 271 t ORIGIN 1 ggtgtctccg cgtcgctggg tgggacttgg ctcggcggcc atgggcaagc agaacagcaa 61 gctgcggccc gagatgttgc aggacctgcg agagaacaca gagttctcag agctggagct 121 gcaggagtgg tacaagggct tcctcaagga ctgccccaca ggaatcctca atgtggatga 181 gttcaagaag atctacgcca acttctttcc ctatggtgac gcctccaagt ttgccgagca 241 cgtcttccgc acctttgaca ccaacagcga tggcaccata gactttcggg agttcatcat 301 tgcgctgagc gtgacctcgc gcggccgcct ggagcagaag ctcatgtggg ccttcagcat 361 gtatgacctg gacggcaacg gctacatcag ccgggaggag atgctggaga tcgtgcaggc 421 catttacaag atggtttcgt ccgtgatgaa gatgccggag gacgagtcga ccccggaaaa 481 gaggactgag aaaatcttcc gccaaatgga cacaaacaac gacggcaagc tgtccttgga 541 ggagttcatc cgcggggcca aaagcgaccc gtccatcgtg cgtctgctgc agtgcgaccc 601 cagcagcgcc tcccagttct gagaggagcc aggttcccct tcctccctcc cttcaccggc 661 cccctcccgg ctcttagctt ccactccctt gtgtgtattc tggctggggg ccagattggg 721 gaagcccttc tccccgggtc tgccctgtgg ggggcttccg gaaaagggaa ccctgcggta 781 cccccaggcc aaagcaagta agcggttagc accccccaat cccagaggca acaatagaga 841 cacaggctgg gttggtctgc ccctcagtca ggccccctta cccacccacc agccccaagg 901 cccgacccct cccccaaagg ggcagtcccc ttcttgcagg tctcagcttg cggggtgggg 961 ggagtcatgc ccaggggagg agacttttta tctggagggg agagaaggat tctaggggtg 1021 tggagttgga gaaagaggct tccttgagcc acccttccca ccccagccct tgctggtccc 1081 taggccaagc caccaagtga aaccttccag gatactagcc cgccagctgt gggccccaga 1141 aagccagcct gccttttagc acttggatac acacagaccc acggagctct ctgtgtttgg 1201 cctctcacac acacacaggc ccatagacag atgggcagat gcacccagag ccccatgcac 1261 agtgtcctgc gtgggaaaga gacacggtcc ccctggctga gcccctgtcc tcccctctgt 1321 ccccccaacc gccccccctg catgcagcca aatggagcat ctctgttctt tttaataatt 1381 tcagaataaa gtctcatttc agtgcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //