LOCUS BC001757 2020 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens claudin domain containing 1, mRNA (cDNA clone MGC:3316 IMAGE:3509929), complete cds. ACCESSION BC001757 VERSION BC001757.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2020) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2020) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-JAN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC001757.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: f Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 11096339. FEATURES Location/Qualifiers source 1..2020 /db_xref="H-InvDB:HIT000050402" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3316 IMAGE:3509929" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2020 /gene="CLDND1" /gene_synonym="GENX-3745" /gene_synonym="MGC111162" /gene_synonym="MGC3316" /gene_synonym="MGC9861" /db_xref="GeneID:56650" /db_xref="HGNC:HGNC:1322" CDS 95..856 /gene="CLDND1" /gene_synonym="GENX-3745" /gene_synonym="MGC111162" /gene_synonym="MGC3316" /gene_synonym="MGC9861" /codon_start=1 /product="claudin domain containing 1" /protein_id="AAH01757.2" /db_xref="GeneID:56650" /db_xref="HGNC:HGNC:1322" /translation="MDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYRSPVQENSS DLNKSIWDEFISDEADEKTYNDALFRYNGTVGLWRRCITIPKNMHWYSPPERTESFDV VTKCVSFTLTEQFMEKFVDPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLC ACICRSLYPTIATGILHLLAGLCTLGSVSCYVAGIELLHQKLELPDNVSGEFGWSFCL ACVSAPLQFMASALFIWAAHTNRKEYTLMKAYRVA" BASE COUNT 587 a 392 c 366 g 675 t ORIGIN 1 agctggcgga gcaggaggat gggcgtatgc aggtgataga ctagagaaca agacctctgt 61 ctccgtagca tcctggagca gtctgaatgc cagaatggat aaccgttttg ctacagcatt 121 tgtaattgct tgtgtgctta gcctcatttc caccatctac atggcagcct ccattggcac 181 agacttctgg tatgaatatc gaagtccagt tcaagaaaat tccagtgatt tgaataaaag 241 catctgggat gaattcatta gtgatgaggc agatgaaaag acttataatg atgcactttt 301 tcgatacaat ggcacagtgg gattgtggag acggtgtatc accataccca aaaacatgca 361 ttggtatagc ccaccagaaa ggacagagtc atttgatgtg gtcacaaaat gtgtgagttt 421 cacactaact gagcagttca tggagaaatt tgttgatccc ggaaaccaca atagcgggat 481 tgatctcctt aggacctatc tttggcgttg ccagttcctt ttaccttttg tgagtttagg 541 tttgatgtgc tttggggctt tgatcggact ttgtgcttgc atttgccgaa gcttatatcc 601 caccattgcc acgggcattc tccatctcct tgcaggtctg tgtacactgg gctcagtaag 661 ttgttatgtt gctggaattg aactactcca ccagaaacta gagctccctg acaatgtatc 721 cggtgaattt ggatggtcct tctgcctggc ttgtgtctct gctcccttac agttcatggc 781 ttctgctctc ttcatctggg ctgctcacac caaccggaaa gagtacacct taatgaaggc 841 atatcgtgtg gcatgagcaa gaaactgcct gctttacaat tgccattttt atttttttaa 901 aataatactg atattttccc cacctctcaa ttgtttttaa tttttatttg tggatatacc 961 attttattat gaaaatctat tttatttata cacattcacc actaaataca cacttaatac 1021 cactaaaatt tatgtggttt actttaagcg atgccatctt tcaaataaac taatctaggt 1081 ctagacagaa agaaatggat agagacttga cacaaattta tgaaagaaaa ttgggagtag 1141 gaatgtgacc gaaaacaagt tgtgctaatg tctgttagac ttttcagtaa aactaaagta 1201 actgtatctg ttcaactaaa aactctatat tagtttcttt gggaaacctc tcatcgtcaa 1261 aactttgttc actttgctgt tgtagatagc cagtcaacca gcagtattag tgctgttttc 1321 aaagatttaa gctctataaa attgggaaat tatctaagat cattttccct aagcattgac 1381 acatagcttc atctgaggtg agatatggca gctgtttgta tctgcactgt gtctgtctac 1441 aaaaagtgaa aaatacagtg tttacttgaa attttaactt tgtaactgca agaattccag 1501 ttcagccggg cgaggattag tattattttt aactctccgt aagattttca gtaccaccaa 1561 attgttttgg attttttttc tttcctcttc acataccagg gttattaaaa gtgtgctttc 1621 tttttacatt atattacagt tacaaggtaa aattcctcaa ctgctattta tttattccag 1681 cccagtacta taaagaacgt ttcaccataa tgaccctcca gagctgggaa acctaccaca 1741 agatctaaag ttctggctgt ccattaacct ccaactatgg tctttatttc ttgtggtaat 1801 atgatgtgcc tttccttgcc taaatccctt cctggtgtgt atcaacatta tttaatgtct 1861 tctaattcag tcattttttt ataagtatgt ctataaacat tgaactttaa aaaacttatt 1921 tatttattcc actactgtag caattgacag attaaaaaaa tgtaacttca taatttctta 1981 ccataacctc aatgtctttt ttaaaaaaaa aaaaaaaaaa //