LOCUS BC001293 1989 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens homeobox C10, mRNA (cDNA clone MGC:5259 IMAGE:3458115), complete cds. ACCESSION BC001293 VERSION BC001293.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1989) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1989) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 4 Row: e Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24497532. FEATURES Location/Qualifiers source 1..1989 /db_xref="H-InvDB:HIT000030298" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5259 IMAGE:3458115" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1989 /gene="HOXC10" /gene_synonym="MGC5259" /db_xref="GeneID:3226" /db_xref="HGNC:HGNC:5122" /db_xref="MIM:605560" CDS 72..1100 /gene="HOXC10" /gene_synonym="MGC5259" /codon_start=1 /product="homeobox C10" /protein_id="AAH01293.1" /db_xref="GeneID:3226" /db_xref="HGNC:HGNC:5122" /db_xref="MIM:605560" /translation="MTCPRNVTPNSYAEPLAAPGGGERYSRSAGMYMQSGSDFNCGVM RGCGLAPSLSKRDEGSSPSLALNTYPSYLSQLDSWGDPKAAYRLEQPVGRPLSSCSYP PSVKEENVCCMYSAEKRAKSGPEAALYSHPLPESCLGEHEVPVPSYYRASPSYSALDK TPHCSGANDFEAPFEQRASLNPRAEHLESPQLGGKVSFPETPKSDSQTPSPNEIKTEQ SLAGPKGSPSESEKERAKAADSSPDTSDNEAKEEIKAENTTGNWLTAKSGRKKRCPYT KHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVKIWFQNRRMKLKKMNRENRIRE LTSNFNFT" BASE COUNT 557 a 553 c 467 g 412 t ORIGIN 1 cggatgggga aaaaaaaaga tgtcagctcc tccgctgtag tattgctcct taaaaacccc 61 tctctctgaa aatgacatgc cctcgcaatg taactccgaa ctcgtacgcg gagcccttgg 121 ctgcgcccgg cggaggagag cgctatagcc ggagcgcagg catgtatatg cagtctggga 181 gtgacttcaa ttgcggggtg atgaggggct gcgggctcgc gccctcgctc tccaagaggg 241 acgagggcag cagccccagc ctcgccctca acacctatcc gtcctacctc tcgcagctgg 301 actcctgggg cgaccccaaa gccgcctatc gcctggaaca acctgttggc aggccgctgt 361 cctcctgctc ctacccacct agtgtcaagg aggagaatgt ctgctgcatg tacagcgcag 421 agaagcgggc gaaaagtggc cccgaggcag ctctctactc ccaccccttg ccggagtcct 481 gccttgggga gcacgaggta cccgtgccca gctactaccg cgccagcccg agctactccg 541 cgctggacaa gacgccccac tgttctgggg ccaacgactt cgaagcccct ttcgagcagc 601 gggccagtct caacccgcgc gccgaacatc tggaatcgcc tcagctgggg ggcaaagtga 661 gtttccctga gacccccaag tccgacagcc agacccccag ccccaatgaa atcaagacgg 721 agcagagcct ggcgggccct aaagggagcc cctcggagag cgaaaaggag agggccaaag 781 ctgccgactc cagcccagac acctcggata acgaagcgaa agaggagata aaggcagaaa 841 acaccacagg aaattggctg acagcaaaga gcggaaggaa gaagaggtgc ccctatacta 901 aacaccagac gctggaattg gagaaagaat ttctgttcaa tatgtatttg acgcgagagc 961 gccgcctgga gattagcaag accattaacc ttacagacag acaagtcaaa atctggtttc 1021 aaaatcgcag aatgaaactc aagaaaatga accgagagaa tcggatccgg gaactgacct 1081 ccaattttaa tttcacctga gagcgcggcc tctcctcctc ccttcccgct ccttcctctc 1141 cccgcccctc ctccctttgt gcctggtgat atattttttt ttcctccctg agtataaatg 1201 caatgcgact gcaaaaaagg caaagacctc agactctcct tccaagggac ctgtggttcg 1261 tgctgcgaag atgcttccac ttaaagcatg agaaatgggg tgccgggatg tggggtgtgg 1321 tgtgtgccct catagatggg ggtgggagtg tggctggtgt gtgtgtcaaa ccctcactca 1381 cccacgcact cacacacagc attctgttct ccatgcaaag ttaagatcga atccatccgc 1441 ttgtagggga aaaaaaggaa aaaaattaac cagagagggt ctgtaatctc gcagagcaca 1501 ggcagaatcg ttccttcctt gctgcatttc ctccttagac taatagacgt tttggaaagt 1561 tcggctagtg ttcgtgtgtt tgtcgtagca cccagagcct ccaccaaacc ctctccatgt 1621 ctttacctcc cagtcgctct aagaatctgc ttgaagtctc gtatttgtac tgctttctgc 1681 ttttctccca cccctcctag cacccccaca tcccccatct agtaacatct cagaaatttc 1741 atccagagga acaaaaaaat taaaaataga acatagcaaa gcaaagacag aatgcccccc 1801 cccaaatatt gtcctgtccc tgtctgggag ttgtgttatt taaagatatt ctgtatgttg 1861 tatcttttgc atgtagcttc cttaatggag aaaaaaaaat cctaataaat ttccagaatc 1921 ataatcctca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1981 aaaaaaaaa //