LOCUS       BC000614                1948 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens histone deacetylase 3, mRNA (cDNA clone MGC:2041
            IMAGE:3345755), complete cds.
ACCESSION   BC000614
VERSION     BC000614.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1948)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1948)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2000) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 5 Row: i Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 13128861.
FEATURES             Location/Qualifiers
     source          1..1948
                     /db_xref="H-InvDB:HIT000029776"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:2041 IMAGE:3345755"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_20"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1948
                     /gene="HDAC3"
                     /gene_synonym="HD3"
                     /gene_synonym="RPD3"
                     /gene_synonym="RPD3-2"
                     /db_xref="GeneID:8841"
                     /db_xref="HGNC:HGNC:4854"
                     /db_xref="MIM:605166"
     CDS             56..1342
                     /gene="HDAC3"
                     /gene_synonym="HD3"
                     /gene_synonym="RPD3"
                     /gene_synonym="RPD3-2"
                     /codon_start=1
                     /product="histone deacetylase 3"
                     /protein_id="AAH00614.1"
                     /db_xref="GeneID:8841"
                     /db_xref="HGNC:HGNC:4854"
                     /db_xref="MIM:605166"
                     /translation="MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKK
                     MIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFE
                     FCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKY
                     HPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYC
                     LNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH
                     GECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAP
                     DFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDE
                     ADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI"
BASE COUNT          454 a          507 c          505 g          482 t
ORIGIN      
        1 gcggcggccg cgggcggcgg gcggcggagg tgcggggcct gctcccgccg gcaccatggc
       61 caagaccgtg gcctatttct acgaccccga cgtgggcaac ttccactacg gagctggaca
      121 ccctatgaag ccccatcgcc tggcattgac ccatagcctg gtcctgcatt acggtctcta
      181 taagaagatg atcgtcttca agccatacca ggcctcccag catgacatgt gccgcttcca
      241 ctccgaggac tacattgact tcctgcagag agtcagcccc accaatatgc aaggcttcac
      301 caagagtctt aatgccttca acgtaggcga tgactgccca gtgtttcccg ggctctttga
      361 gttctgctcg cgttacacag gcgcatctct gcaaggagca acccagctga acaacaagat
      421 ctgtgatatt gccattaact gggctggtgg tctgcaccat gccaagaagt ttgaggcctc
      481 tggcttctgc tatgtcaacg acattgtgat tggcatcctg gagctgctca agtaccaccc
      541 tcgggtgctc tacattgaca ttgacatcca ccatggtgac ggggttcaag aagctttcta
      601 cctcactgac cgggtcatga cggtgtcctt ccacaaatac ggaaattact tcttccctgg
      661 cacaggtgac atgtatgaag tcggggcaga gagtggccgc tactactgtc tgaacgtgcc
      721 cctgcgggat ggcattgatg accagagtta caagcacctt ttccagccgg ttatcaacca
      781 ggtagtggac ttctaccaac ccacgtgcat tgtgctccag tgtggagctg actctctggg
      841 ctgtgatcga ttgggctgct ttaacctcag catccgaggg catggggaat gcgttgaata
      901 tgtcaagagc ttcaatatcc ctctactcgt gctgggtggt ggtggttata ctgtccgaaa
      961 tgttgcccgc tgctggacat atgagacatc gctgctggta gaagaggcca ttagtgagga
     1021 gcttccctat agtgaatact tcgagtactt tgccccagac ttcacacttc atccagatgt
     1081 cagcacccgc atcgagaatc agaactcacg ccagtatctg gaccagatcc gccagacaat
     1141 ctttgaaaac ctgaagatgc tgaaccatgc acctagtgtc cagattcatg acgtgcctgc
     1201 agacctcctg acctatgaca ggactgatga ggctgatgca gaggagaggg gtcctgagga
     1261 gaactatagc aggccagagg cacccaatga gttctatgat ggagaccatg acaatgacaa
     1321 ggaaagcgat gtggagattt aagagtggct tgggatgctg tgtcccaagg aatttctttt
     1381 cacctcttgg ttgggctgga gggaaaagga gtggctccta gagtcctggg ggtcacccca
     1441 gggcttttgc tgactctggg aaagagtctg gagaccacat ttggttctcg aaccatctac
     1501 ctgcttttcc tctctctccc aaggcctgac aatggtacct attagggatg agatacagac
     1561 aaggatagct atctgggaca ttattggcag tgggccctgg aggccagtcc ctagcccccc
     1621 ttgcccctta tttcttccct gcttccctcg aacccagaga tttttgaggg atgaacgggt
     1681 agacaaggac tgagattgcc tctgacttcc tcctcccctg ggttctgact tcttcctccc
     1741 cttgcttcca gggaagatga agagagagag atttggaagg ggctctggct ccctaacacc
     1801 tgaatcccag atgatgggaa gtatgttttc aagtgtgggg aggatatgaa aatgttctgt
     1861 tctcactttt ggctttatgt ccattttacc actgttttta tccaataaac taagtcggta
     1921 ttttttgtac aaaaaaaaaa aaaaaaaa
//