LOCUS BC000614 1948 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens histone deacetylase 3, mRNA (cDNA clone MGC:2041 IMAGE:3345755), complete cds. ACCESSION BC000614 VERSION BC000614.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1948) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1948) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: i Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13128861. FEATURES Location/Qualifiers source 1..1948 /db_xref="H-InvDB:HIT000029776" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2041 IMAGE:3345755" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1948 /gene="HDAC3" /gene_synonym="HD3" /gene_synonym="RPD3" /gene_synonym="RPD3-2" /db_xref="GeneID:8841" /db_xref="HGNC:HGNC:4854" /db_xref="MIM:605166" CDS 56..1342 /gene="HDAC3" /gene_synonym="HD3" /gene_synonym="RPD3" /gene_synonym="RPD3-2" /codon_start=1 /product="histone deacetylase 3" /protein_id="AAH00614.1" /db_xref="GeneID:8841" /db_xref="HGNC:HGNC:4854" /db_xref="MIM:605166" /translation="MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKK MIVFKPYQASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFE FCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKY HPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYC LNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH GECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAP DFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTYDRTDE ADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI" BASE COUNT 454 a 507 c 505 g 482 t ORIGIN 1 gcggcggccg cgggcggcgg gcggcggagg tgcggggcct gctcccgccg gcaccatggc 61 caagaccgtg gcctatttct acgaccccga cgtgggcaac ttccactacg gagctggaca 121 ccctatgaag ccccatcgcc tggcattgac ccatagcctg gtcctgcatt acggtctcta 181 taagaagatg atcgtcttca agccatacca ggcctcccag catgacatgt gccgcttcca 241 ctccgaggac tacattgact tcctgcagag agtcagcccc accaatatgc aaggcttcac 301 caagagtctt aatgccttca acgtaggcga tgactgccca gtgtttcccg ggctctttga 361 gttctgctcg cgttacacag gcgcatctct gcaaggagca acccagctga acaacaagat 421 ctgtgatatt gccattaact gggctggtgg tctgcaccat gccaagaagt ttgaggcctc 481 tggcttctgc tatgtcaacg acattgtgat tggcatcctg gagctgctca agtaccaccc 541 tcgggtgctc tacattgaca ttgacatcca ccatggtgac ggggttcaag aagctttcta 601 cctcactgac cgggtcatga cggtgtcctt ccacaaatac ggaaattact tcttccctgg 661 cacaggtgac atgtatgaag tcggggcaga gagtggccgc tactactgtc tgaacgtgcc 721 cctgcgggat ggcattgatg accagagtta caagcacctt ttccagccgg ttatcaacca 781 ggtagtggac ttctaccaac ccacgtgcat tgtgctccag tgtggagctg actctctggg 841 ctgtgatcga ttgggctgct ttaacctcag catccgaggg catggggaat gcgttgaata 901 tgtcaagagc ttcaatatcc ctctactcgt gctgggtggt ggtggttata ctgtccgaaa 961 tgttgcccgc tgctggacat atgagacatc gctgctggta gaagaggcca ttagtgagga 1021 gcttccctat agtgaatact tcgagtactt tgccccagac ttcacacttc atccagatgt 1081 cagcacccgc atcgagaatc agaactcacg ccagtatctg gaccagatcc gccagacaat 1141 ctttgaaaac ctgaagatgc tgaaccatgc acctagtgtc cagattcatg acgtgcctgc 1201 agacctcctg acctatgaca ggactgatga ggctgatgca gaggagaggg gtcctgagga 1261 gaactatagc aggccagagg cacccaatga gttctatgat ggagaccatg acaatgacaa 1321 ggaaagcgat gtggagattt aagagtggct tgggatgctg tgtcccaagg aatttctttt 1381 cacctcttgg ttgggctgga gggaaaagga gtggctccta gagtcctggg ggtcacccca 1441 gggcttttgc tgactctggg aaagagtctg gagaccacat ttggttctcg aaccatctac 1501 ctgcttttcc tctctctccc aaggcctgac aatggtacct attagggatg agatacagac 1561 aaggatagct atctgggaca ttattggcag tgggccctgg aggccagtcc ctagcccccc 1621 ttgcccctta tttcttccct gcttccctcg aacccagaga tttttgaggg atgaacgggt 1681 agacaaggac tgagattgcc tctgacttcc tcctcccctg ggttctgact tcttcctccc 1741 cttgcttcca gggaagatga agagagagag atttggaagg ggctctggct ccctaacacc 1801 tgaatcccag atgatgggaa gtatgttttc aagtgtgggg aggatatgaa aatgttctgt 1861 tctcactttt ggctttatgt ccattttacc actgttttta tccaataaac taagtcggta 1921 ttttttgtac aaaaaaaaaa aaaaaaaa //