LOCUS BC000612 1691 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens katanin p60 subunit A-like 1, mRNA (cDNA clone MGC:2599 IMAGE:3347282), complete cds. ACCESSION BC000612 VERSION BC000612.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1691) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1691) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC000612.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 5 Row: g Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62177113. FEATURES Location/Qualifiers source 1..1691 /db_xref="H-InvDB:HIT000029774" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2599 IMAGE:3347282" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1691 /gene="KATNAL1" /gene_synonym="MGC2599" /db_xref="GeneID:84056" /db_xref="HGNC:HGNC:28361" CDS 132..1604 /gene="KATNAL1" /gene_synonym="MGC2599" /codon_start=1 /product="katanin p60 subunit A-like 1" /protein_id="AAH00612.1" /db_xref="GeneID:84056" /db_xref="HGNC:HGNC:28361" /translation="MNLAEICDNAKKGREYALLGNYDSSMVYYQGVMQQIQRHCQSVR DPAIKGKWQQVRQELLEEYEQVKSIVSTLESFKIDKPPDFPVSCQDEPFRDPAVWPPP VPAEHRAPPQIRRPNREVRPLRKEMAGVGARGPVGRAHPISKSEKPSTSRDKDYRARG RDDKGRKNMQDGASDGEMPKFDGAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKK LLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSST LTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLI QMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKI NLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKE ELQMPVTKGDFELALKKIAKSVSAADLEKYEKWMVEFGSA" BASE COUNT 509 a 322 c 431 g 429 t ORIGIN 1 ccttttcacg cgcgtcgcga gctaacggac tcggcggcgg cggcggcggc ggcctgcgcc 61 ccacccgcac cccatctgga ccgcatcgct gaatgtgccc ggacctgcgc cttctgggtc 121 tctgaaagaa gatgaatttg gctgagattt gtgataatgc aaagaaagga agagaatatg 181 cccttcttgg aaattacgac tcatcaatgg tatattacca gggggtgatg cagcagattc 241 agagacattg ccagtcagtc agagatccag ctatcaaagg caaatggcaa caggttcggc 301 aggaattatt ggaggaatat gaacaagtta aaagtattgt cagcacttta gaaagtttta 361 aaattgacaa gcctccagat ttccctgtgt cctgtcaaga tgaaccattt agagatcctg 421 ctgtttggcc accccctgtt cctgcagaac acagagctcc acctcagatc aggcgtccca 481 atcgagaagt aagacctctg aggaaagaaa tggcaggagt aggagcccgg ggacctgtag 541 gccgagcaca tcctatatca aagagtgaaa agccttctac aagtagggac aaggactata 601 gagcaagagg gagagatgac aagggaagga agaatatgca agatggtgca agtgatggtg 661 aaatgccaaa atttgatggt gctggttatg ataaggatct ggtggaagcc cttgaaagag 721 acattgtatc caggaatcct agcattcatt gggatgacat agcagatctg gaagaagcta 781 agaagttgct aagggaagct gttgttcttc caatgtggat gcctgacttt ttcaaaggga 841 ttagaaggcc atggaagggt gtactgatgg ttggaccccc aggcactggt aaaactatgc 901 tagctaaagc tgttgccact gaatgtggta caacattctt caacgtttcg tcttctacac 961 tgacatctaa atacagaggt gaatctgaga agttagttcg tctgttgttt gagatggcta 1021 gattttatgc ccctaccacg atcttcattg atgagataga ttctatctgc agtcgaagag 1081 gaacctctga tgaacatgag gcaagtcgca gggtcaagtc tgaactgctc attcagatgg 1141 atggagttgg aggagcttta gaaaatgatg atccttccaa aatggttatg gtattggctg 1201 ctactaattt cccgtgggac attgatgaag ctttgcgaag aaggttagaa aaaaggatat 1261 atatacctct cccaacagca aaaggaagag ctgagcttct gaagatcaac cttcgtgagg 1321 tcgaattaga tcctgatatt caactggaag atatagccga gaagattgag ggctattctg 1381 gtgctgacat cactaatgtt tgcagggatg cctctttaat ggcaatgaga cggcgtatca 1441 atggcttaag tccagaagaa atccgtgcac tttctaaaga ggaacttcag atgcctgtta 1501 ccaaaggaga ctttgaattg gccctaaaga aaattgctaa gtctgtctct gctgcagact 1561 tggagaagta tgaaaaatgg atggttgaat ttggatctgc ttgaatttct gtcagctctt 1621 taatttctgg tatttttgtt gataaaatac gaagaaattc ctgcaatttt taaaaaaaaa 1681 aaaaaaaaaa a //