LOCUS BC000612 1691 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens katanin p60 subunit A-like 1, mRNA (cDNA clone
MGC:2599 IMAGE:3347282), complete cds.
ACCESSION BC000612
VERSION BC000612.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1691)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1691)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000612.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: g Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62177113.
FEATURES Location/Qualifiers
source 1..1691
/db_xref="H-InvDB:HIT000029774"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2599 IMAGE:3347282"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1691
/gene="KATNAL1"
/gene_synonym="MGC2599"
/db_xref="GeneID:84056"
/db_xref="HGNC:HGNC:28361"
CDS 132..1604
/gene="KATNAL1"
/gene_synonym="MGC2599"
/codon_start=1
/product="katanin p60 subunit A-like 1"
/protein_id="AAH00612.1"
/db_xref="GeneID:84056"
/db_xref="HGNC:HGNC:28361"
/translation="MNLAEICDNAKKGREYALLGNYDSSMVYYQGVMQQIQRHCQSVR
DPAIKGKWQQVRQELLEEYEQVKSIVSTLESFKIDKPPDFPVSCQDEPFRDPAVWPPP
VPAEHRAPPQIRRPNREVRPLRKEMAGVGARGPVGRAHPISKSEKPSTSRDKDYRARG
RDDKGRKNMQDGASDGEMPKFDGAGYDKDLVEALERDIVSRNPSIHWDDIADLEEAKK
LLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSST
LTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDEHEASRRVKSELLI
QMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKI
NLREVELDPDIQLEDIAEKIEGYSGADITNVCRDASLMAMRRRINGLSPEEIRALSKE
ELQMPVTKGDFELALKKIAKSVSAADLEKYEKWMVEFGSA"
BASE COUNT 509 a 322 c 431 g 429 t
ORIGIN
1 ccttttcacg cgcgtcgcga gctaacggac tcggcggcgg cggcggcggc ggcctgcgcc
61 ccacccgcac cccatctgga ccgcatcgct gaatgtgccc ggacctgcgc cttctgggtc
121 tctgaaagaa gatgaatttg gctgagattt gtgataatgc aaagaaagga agagaatatg
181 cccttcttgg aaattacgac tcatcaatgg tatattacca gggggtgatg cagcagattc
241 agagacattg ccagtcagtc agagatccag ctatcaaagg caaatggcaa caggttcggc
301 aggaattatt ggaggaatat gaacaagtta aaagtattgt cagcacttta gaaagtttta
361 aaattgacaa gcctccagat ttccctgtgt cctgtcaaga tgaaccattt agagatcctg
421 ctgtttggcc accccctgtt cctgcagaac acagagctcc acctcagatc aggcgtccca
481 atcgagaagt aagacctctg aggaaagaaa tggcaggagt aggagcccgg ggacctgtag
541 gccgagcaca tcctatatca aagagtgaaa agccttctac aagtagggac aaggactata
601 gagcaagagg gagagatgac aagggaagga agaatatgca agatggtgca agtgatggtg
661 aaatgccaaa atttgatggt gctggttatg ataaggatct ggtggaagcc cttgaaagag
721 acattgtatc caggaatcct agcattcatt gggatgacat agcagatctg gaagaagcta
781 agaagttgct aagggaagct gttgttcttc caatgtggat gcctgacttt ttcaaaggga
841 ttagaaggcc atggaagggt gtactgatgg ttggaccccc aggcactggt aaaactatgc
901 tagctaaagc tgttgccact gaatgtggta caacattctt caacgtttcg tcttctacac
961 tgacatctaa atacagaggt gaatctgaga agttagttcg tctgttgttt gagatggcta
1021 gattttatgc ccctaccacg atcttcattg atgagataga ttctatctgc agtcgaagag
1081 gaacctctga tgaacatgag gcaagtcgca gggtcaagtc tgaactgctc attcagatgg
1141 atggagttgg aggagcttta gaaaatgatg atccttccaa aatggttatg gtattggctg
1201 ctactaattt cccgtgggac attgatgaag ctttgcgaag aaggttagaa aaaaggatat
1261 atatacctct cccaacagca aaaggaagag ctgagcttct gaagatcaac cttcgtgagg
1321 tcgaattaga tcctgatatt caactggaag atatagccga gaagattgag ggctattctg
1381 gtgctgacat cactaatgtt tgcagggatg cctctttaat ggcaatgaga cggcgtatca
1441 atggcttaag tccagaagaa atccgtgcac tttctaaaga ggaacttcag atgcctgtta
1501 ccaaaggaga ctttgaattg gccctaaaga aaattgctaa gtctgtctct gctgcagact
1561 tggagaagta tgaaaaatgg atggttgaat ttggatctgc ttgaatttct gtcagctctt
1621 taatttctgg tatttttgtt gataaaatac gaagaaattc ctgcaatttt taaaaaaaaa
1681 aaaaaaaaaa a
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