LOCUS BC000391 1056 bp mRNA linear HUM 06-NOV-2003 DEFINITION Homo sapiens nth endonuclease III-like 1 (E. coli), mRNA (cDNA clone IMAGE:2821314), partial cds. ACCESSION BC000391 VERSION BC000391.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1056) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1056) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Nov 6, 2003 this sequence version replaced BC000391.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: e Column: 24. FEATURES Location/Qualifiers source 1..1056 /db_xref="H-InvDB:HIT000029580" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2821314" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1056 /gene="NTHL1" /gene_synonym="NTH1" /gene_synonym="OCTS3" /db_xref="GeneID:4913" /db_xref="MIM:602656" CDS <1..918 /gene="NTHL1" /gene_synonym="NTH1" /gene_synonym="OCTS3" /codon_start=1 /product="NTHL1 protein" /protein_id="AAH00391.2" /db_xref="GeneID:4913" /db_xref="MIM:602656" /translation="GMTALSARMLTRSRSLGPGAGPRGCREEPGPLRRREAAAEARKS HSPVKRPRKAQRLRVAYEGSDSEKGEGAEPLKVPVWEPQDWQQQLVNIRAMRNKKDAP VDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGLTVDSILQT DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLA MAVAWGTVSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLV GFGQQTCLPVHPRCHACLNQALCPAAQGL" misc_feature 391..840 /gene="NTHL1" /gene_synonym="NTH1" /gene_synonym="OCTS3" /note="ENDO3c; Region: endonuclease III" /db_xref="CDD:smart00478" misc_feature 844..906 /gene="NTHL1" /gene_synonym="NTH1" /gene_synonym="OCTS3" /note="FES; Region: iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)" /db_xref="CDD:smart00525" BASE COUNT 239 a 300 c 352 g 165 t ORIGIN 1 ggcatgaccg ccttgagcgc gaggatgctg acccggagcc ggagcctggg acccggggct 61 gggccgcggg ggtgtaggga ggagcccggg cctctccgga gaagagaggc tgcagcagaa 121 gcgaggaaaa gccacagccc cgtgaagcgt ccgcggaaag cacagagact gcgtgtggcc 181 tatgagggct cggacagtga gaaaggtgag ggggctgagc ccctcaaggt gccagtctgg 241 gagccccagg actggcagca acagctggtc aacatccgtg ccatgaggaa caaaaaggat 301 gcacctgtgg accatctggg gactgagcac tgctatgact ccagtgcccc cccaaaggta 361 cgcaggtacc aggtgctgct gtcactgatg ctctccagcc aaaccaaaga ccaggtgacg 421 gcgggcgcca tgcagcgact gcgggcgcgg ggcctgacgg tggacagcat cctgcagaca 481 gatgatgcca cgctgggcaa gctcatctac cccgtcggtt tctggaggag caaggtgaaa 541 tacatcaagc agaccagcgc catcctgcag cagcactacg gtggggacat cccagcctct 601 gtggccgagc tggtggcgct gccgggtgtt gggcccaaga tggcacacct ggctatggct 661 gtggcctggg gcactgtgtc aggcattgca gtggacacgc atgtgcacag aatcgccaac 721 aggctgaggt ggaccaagaa ggcaaccaag tccccagagg agacccgcgc cgccctggag 781 gagtggctgc ctagggagct gtggcacgag atcaatggac tcttggtggg cttcggccag 841 cagacctgtc tgcctgtgca ccctcgctgc cacgcctgcc tcaaccaagc cctctgcccg 901 gccgcccagg gtctctgatg gccgcatggc tctggccgag gtgccgctgt ggccaccgtc 961 tgtgaagtgg ctttacgctt caggaagcca cgcctgttga ataaagcttt ggtgtgtttg 1021 cagatggaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //