LOCUS BC000387 1056 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), mRNA (cDNA clone MGC:8433 IMAGE:2821171), complete cds. ACCESSION BC000387 VERSION BC000387.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1056) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1056) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC000387.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: e Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33620778. FEATURES Location/Qualifiers source 1..1056 /db_xref="H-InvDB:HIT000029576" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8433 IMAGE:2821171" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1056 /gene="LSM4" /gene_synonym="YER112W" /db_xref="GeneID:25804" /db_xref="HGNC:HGNC:17259" /db_xref="MIM:607284" CDS 52..471 /gene="LSM4" /gene_synonym="YER112W" /codon_start=1 /product="LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)" /protein_id="AAH00387.1" /db_xref="GeneID:25804" /db_xref="HGNC:HGNC:17259" /db_xref="MIM:607284" /translation="MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVI CTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGR GMGGAGRGVFGGRGRGGIPGTGRGQPEKKPGRQAGKQ" BASE COUNT 247 a 283 c 318 g 208 t ORIGIN 1 gtgcagcggc ggcggcggaa gtggccggcg agcccggtcc ccgccggcac catgcttccc 61 ttgtcactgc tgaagacggc tcagaatcac cccatgttgg tggagctgaa aaatggggag 121 acgtacaatg gacacctggt gagctgcgac aactggatga acattaacct gcgagaagtc 181 atctgcacgt ccagggacgg ggacaagttc tggcggatgc ccgagtgcta catccgcggc 241 agcaccatca agtacctgcg catccccgac gagatcatcg acatggtcaa ggaggaggtg 301 gtggccaagg gccgcggccg cggaggcctg cagcagcaga agcagcagaa aggccgcggc 361 atgggcggcg ctggccgagg tgtgtttggt ggccggggcc gaggtgggat cccgggcaca 421 ggcagaggcc agccagagaa gaagcctggc agacaggcgg gcaaacagtg agcgcccacc 481 cagaccggct gctgcgcccc ctcctgccag ggtggcgatt ccgctccaca gtctcggacg 541 gatctgctca gaaaggaaga ggcaggcgcc agggggaacc cccttcgtgt tttgtgaccc 601 tcccttttag gtgaagcccc tttttcttgc taaaaccggc aattctccgg ttagaaatgt 661 tacttggtgt tttttggttt tgtgaaacgg ccgtcccaaa gctggctgga ttcctagaag 721 agtctgtgtt gaaggcatct ttcaagccct cgctctggtt ctcagggcag cattttccag 781 gcgggtttgt tttgcatttc ttggagcctc tccgagcagc aaccagacgg gagattttta 841 ttttaagctg ttcatgctgg gactgacagc ctgcagggtt tccttgggcg cggccccaaa 901 attgccttca aaacaaaccc gggacggttg aaagccttcg aaccgtgcag gggatgcctc 961 gggccctggc ccttcgcttc ctctcttgtg ttatggaaat aaaaacaaat aaaactacac 1021 actgcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //