LOCUS BC000244 1718 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens spastic paraplegia 21 (autosomal recessive, Mast syndrome), mRNA (cDNA clone MGC:816 IMAGE:3357388), complete cds. ACCESSION BC000244 VERSION BC000244.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1718) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1718) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: c Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42544234. FEATURES Location/Qualifiers source 1..1718 /db_xref="H-InvDB:HIT000029454" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:816 IMAGE:3357388" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1718 /gene="SPG21" /gene_synonym="ACP33" /gene_synonym="BM-019" /gene_synonym="GL010" /gene_synonym="MAST" /db_xref="GeneID:51324" /db_xref="HGNC:HGNC:20373" /db_xref="MIM:608181" CDS 177..1103 /gene="SPG21" /gene_synonym="ACP33" /gene_synonym="BM-019" /gene_synonym="GL010" /gene_synonym="MAST" /codon_start=1 /product="spastic paraplegia 21 (autosomal recessive, Mast syndrome)" /protein_id="AAH00244.1" /db_xref="GeneID:51324" /db_xref="HGNC:HGNC:20373" /db_xref="MIM:608181" /translation="MGEIKVSPDYNWFRGTVPLKKIIVDDDDSKIWSLYDAGPRSIRC PLIFLPPVSGTADVFFRQILALTGWGYRVIALQYPVYWDHLEFCDGFRKLLDHLQLDK VHLFGASLGGFLAQKFAEYTHKSPRVHSLILCNSFSDTSIFNQTWTANSFWLMPAFML KKIVLGNFSSGPVDPMMADAIDFMVDRLESLGQSELASRLTLNCQNSYVEPHKIRDIP VTIMDVFDQSALSTEAKEEMYKLYPNARRAHLKTGGNFPYLCRSAEVNLYVQIHLLQF HGTKYAAIDPSMVSAEELEVQKGSLGISQEEQ" BASE COUNT 416 a 389 c 389 g 524 t ORIGIN 1 gcacgcaccg cgcagcctgc tgtgcccgtg ggtcccgagt gctccgccgc ccgccccgac 61 ccgggcccag ccgcctccac ggcccgcgct cgtactggag cgaagagcgg cctcctgaag 121 gaggggaagg gacgtggggg cggccacggc aggattaacc tccatttcag ctaatcatgg 181 gagagattaa agtctctcct gattataact ggtttagagg tacagttccc cttaaaaaga 241 ttattgtgga tgatgatgac agtaagatat ggtcgctcta tgacgcgggc ccccgaagta 301 tcaggtgtcc tctcatattc ctgccccctg tcagtggaac tgcagatgtc tttttccggc 361 agattttggc tctgactgga tggggttacc gggttatcgc tttgcagtat ccagtttatt 421 gggaccatct cgagttctgt gatggattca gaaaactttt agaccattta caattggata 481 aagttcatct ttttggcgct tctttgggag gctttttggc ccagaaattt gctgaataca 541 ctcacaaatc tcctagagtc cattccctaa tcctctgcaa ttccttcagt gacacctcta 601 tcttcaacca aacttggact gcaaacagct tttggctgat gcctgcattt atgctcaaaa 661 aaatagttct tggaaatttt tcatctggcc cggtggaccc tatgatggct gatgccattg 721 atttcatggt agacaggcta gaaagtttgg gtcagagtga actggcttca agacttacct 781 tgaattgtca aaattcttat gtggaacctc ataaaattcg ggacatacct gtaactatta 841 tggatgtgtt tgatcagagt gcgctttcaa ctgaagctaa agaagaaatg tacaagctgt 901 atcctaatgc ccgaagagct catctgaaaa caggaggcaa tttcccatac ctgtgcagaa 961 gtgcagaggt caatctttat gtacagatac atttgctgca attccatgga accaaatacg 1021 cggccattga cccatcaatg gtcagtgccg aggagcttga ggtgcagaaa ggcagccttg 1081 gcatcagcca ggaggagcag tagtgtgtct ctcgctgtca atgatgagtt gacccggtgt 1141 gttcttgtat agtcagtggc atcagcaccc gtcagccggc cttttccttc aggttcgtca 1201 ggctcaccgg ttctcactgt gtctgggaag taggactgat ggtcatcttc atgacaggcg 1261 gcatctccac taagcctgtg taactgttcc ctctttggtt ttcttagctt ttgaatttga 1321 agaagtactt ttgaagactc ccattttaag aaccgtgcag attttgctac caaaagtctt 1381 caccactgtg ttcttaagtg aatgttaatt tctgaggttt gggactttgt ggtggttttt 1441 ttcttctttt cttttccatt cttctttctt tctttttatg ttgtttgctg taaatgctgc 1501 acatccagat tgcatatcag gacattggtt attttatgct ttcttggata taaccatgat 1561 cagagtgcca tggccactac cccactgttt gctctcctgc aaatcaactg cttttaattt 1621 acacttaaac aaattgtttt gagtgttagc tactgccttt ctagatatta gtcatttgga 1681 ataaaaattc aatttcactg aaaaaaaaaa aaaaaaaa //