LOCUS BC000059 2479 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila), mRNA (cDNA clone IMAGE:3506648), partial cds. ACCESSION BC000059 VERSION BC000059.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2479) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2479) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 28, 2003 this sequence version replaced BC000059.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: a Column: 6. FEATURES Location/Qualifiers source 1..2479 /db_xref="H-InvDB:HIT000085778" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3506648" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2479 /gene="CELSR1" /gene_synonym="CDHF9" /gene_synonym="FMI2" /gene_synonym="HFMI2" /gene_synonym="ME2" /db_xref="GeneID:9620" /db_xref="MIM:604523" CDS <1..2318 /gene="CELSR1" /gene_synonym="CDHF9" /gene_synonym="FMI2" /gene_synonym="HFMI2" /gene_synonym="ME2" /codon_start=3 /product="CELSR1 protein" /protein_id="AAH00059.2" /db_xref="GeneID:9620" /db_xref="MIM:604523" /translation="DFPFQIHNSSGWITVCAELDREEVDHYSFGVEAVDHGWPPMSSS TSVSITVLDVNDNDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDANSVITYQLTGGN TRNRFALSSQRGGGLITLALPLDYKQEQQYVLAVTASDGTRSHTAHVLINVTDANTHR PVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTM YTMMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIF EDAPPSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN VAVYNLWALAVDRGSPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVV AKIRANDPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYVLVVQA TSAPLVSRATVHILLVDQNDNPPVLPDFQILFNNYVTNKSNSFPTGVIGRIPAHDPDV SDSLNYTFVQGNELRLLLLDPATGELQLSRDLDNNRPLEALMEVSVSDGIHSVTAFCT LRVTIITDDMLTNSITVRLENMSQEKFLSPLLALFVEGVAAVLSTTKDDVFVFNVQND TDVSSNILNVTFSALLPGGVRGQFFPSEDLQEQIYLNRTLLTTISTQRVLPFDDNICL REPCENYMKCVSVLRFDSSAPFLSSTTVLFRPIHPINGLRCRCPPGFTGDYCETEIDL CYSDPCGANGRCRSREGGYTCECFEDFTEIS" BASE COUNT 533 a 809 c 671 g 466 t ORIGIN 1 ctgacttccc cttccagatc cacaacagct ccggttggat cacagtgtgt gccgagctgg 61 accgcgagga ggtggatcac tacagcttcg gggtggaggc ggtggaccac ggctggcccc 121 ccatgagctc ctccaccagc gtgtccatca cggtgctgga cgtgaatgac aacgacccgg 181 tgttcacgca gcccacctac gagcttcgtc tgaatgagga tgcggccgtg gggagcagcg 241 tgctgaccct gcaggcccgc gaccgtgacg ccaacagtgt gattacctac cagctcacag 301 gcggcaacac ccggaaccgc tttgcactca gcagccagag agggggcggc ctcatcaccc 361 tggcgctacc tctggactac aagcaggagc agcagtacgt gctggcggtg acagcatccg 421 acggcacacg gtcgcacact gcgcatgtcc taatcaacgt cactgatgcc aacacccaca 481 ggcctgtctt tcagagctcc cattacacag tgagtgtcag tgaggacagg cctgtgggca 541 cctccattgc taccctcagt gccaacgatg aggacacagg agagaatgcc cgcatcacct 601 acgtgattca ggaccccgtg ccgcagttcc gcattgaccc cgacagtggc accatgtaca 661 ccatgatgga gctggactat gagaaccagg tcgcctacac gctgaccatc atggcccagg 721 acaacggcat cccgcagaaa tcagacacca ccaccctaga gatcctcatc ctcgatgcca 781 atgacaatgc accccagttc ctgtgggatt tctaccaggg ttccatcttt gaggatgctc 841 caccctcgac cagcatcctc caggtctctg ccacggaccg ggactcaggt cccaatgggc 901 gtctgctgta caccttccag ggtggggacg acggcgatgg ggacttctac atcgagccca 961 cgtccggtgt gattcgcacc cagcgccggc tggaccggga gaatgtggcc gtgtacaacc 1021 tttgggctct ggctgtggat cggggcagtc ccactcccct tagcgcctcg gtagaaatcc 1081 aggtgaccat cttggacatt aatgacaatg cccccatgtt tgagaaggac gaactggagc 1141 tgtttgttga ggagaacaac ccagtggggt cggtggtggc aaagattcgt gctaacgacc 1201 ctgatgaagg ccctaatgcc cagatcatgt atcagattgt ggaaggggac atgcggcatt 1261 tcttccagct ggacctgctc aacggggacc tgcgtgccat ggtggagctg gactttgagg 1321 tccggcggga gtatgtgctg gtggtgcagg ccacgtcggc tccgctggtg agccgagcca 1381 cggtgcacat ccttctcgtg gaccagaatg acaacccgcc tgtgctgccc gacttccaga 1441 tcctcttcaa caactatgtc accaacaagt ccaacagttt ccccaccggc gtgatcggcc 1501 gcatcccggc ccatgacccc gacgtgtcag acagcctcaa ctacaccttc gtgcagggca 1561 acgagctgcg cctgttgctg ctggaccccg ccacgggcga actgcagctc agccgcgacc 1621 tggacaacaa ccggccgctg gaggcgctca tggaggtgtc tgtgtctgat ggcatccaca 1681 gcgtcacggc cttctgcacc ctgcgtgtca ccatcatcac ggacgacatg ctgaccaaca 1741 gcatcactgt ccgcctggag aacatgtccc aggagaagtt cctgtccccg ctgctggccc 1801 tcttcgtgga gggggtggcc gccgtgctgt ccaccaccaa ggacgacgtc ttcgtcttca 1861 acgtccagaa cgacaccgac gtcagctcca acatcctgaa cgtgaccttc tcggcgctgc 1921 tgcctggcgg cgtccgcggc cagttcttcc cgtcggagga cctgcaggag cagatctacc 1981 tgaatcggac gctgctgacc accatctcca cgcagcgcgt gctgcccttc gacgacaaca 2041 tctgcctgcg cgagccctgc gagaactaca tgaagtgcgt gtccgttctg cgattcgaca 2101 gctccgcgcc cttcctcagc tccaccaccg tgctcttccg gcccatccac cccatcaacg 2161 gcctgcgctg ccgctgcccg cccggcttca ccggcgacta ctgcgagacg gagatcgacc 2221 tctgctactc cgacccgtgc ggcgccaacg gccgctgccg cagccgcgag ggcggctaca 2281 cctgcgagtg cttcgaggac ttcactgaaa tttcgtgact catcctcccg cctctgaaga 2341 tgctctttcc ttgatacctc ctgactcatc accaagatga attactccaa atgtagccaa 2401 cggtggtttt taaaaataaa gagccacccc gagagtggta cagaaaaaaa aaaaaaaaaa 2461 aaaaaaaaaa aaaaaaaaa //