LOCUS BC000059 2479 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens cadherin, EGF LAG seven-pass G-type receptor 1
(flamingo homolog, Drosophila), mRNA (cDNA clone IMAGE:3506648),
partial cds.
ACCESSION BC000059
VERSION BC000059.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2479)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2479)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC000059.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: a Column: 6.
FEATURES Location/Qualifiers
source 1..2479
/db_xref="H-InvDB:HIT000085778"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3506648"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2479
/gene="CELSR1"
/gene_synonym="CDHF9"
/gene_synonym="FMI2"
/gene_synonym="HFMI2"
/gene_synonym="ME2"
/db_xref="GeneID:9620"
/db_xref="MIM:604523"
CDS <1..2318
/gene="CELSR1"
/gene_synonym="CDHF9"
/gene_synonym="FMI2"
/gene_synonym="HFMI2"
/gene_synonym="ME2"
/codon_start=3
/product="CELSR1 protein"
/protein_id="AAH00059.2"
/db_xref="GeneID:9620"
/db_xref="MIM:604523"
/translation="DFPFQIHNSSGWITVCAELDREEVDHYSFGVEAVDHGWPPMSSS
TSVSITVLDVNDNDPVFTQPTYELRLNEDAAVGSSVLTLQARDRDANSVITYQLTGGN
TRNRFALSSQRGGGLITLALPLDYKQEQQYVLAVTASDGTRSHTAHVLINVTDANTHR
PVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVIQDPVPQFRIDPDSGTM
YTMMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIF
EDAPPSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREN
VAVYNLWALAVDRGSPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVV
AKIRANDPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYVLVVQA
TSAPLVSRATVHILLVDQNDNPPVLPDFQILFNNYVTNKSNSFPTGVIGRIPAHDPDV
SDSLNYTFVQGNELRLLLLDPATGELQLSRDLDNNRPLEALMEVSVSDGIHSVTAFCT
LRVTIITDDMLTNSITVRLENMSQEKFLSPLLALFVEGVAAVLSTTKDDVFVFNVQND
TDVSSNILNVTFSALLPGGVRGQFFPSEDLQEQIYLNRTLLTTISTQRVLPFDDNICL
REPCENYMKCVSVLRFDSSAPFLSSTTVLFRPIHPINGLRCRCPPGFTGDYCETEIDL
CYSDPCGANGRCRSREGGYTCECFEDFTEIS"
BASE COUNT 533 a 809 c 671 g 466 t
ORIGIN
1 ctgacttccc cttccagatc cacaacagct ccggttggat cacagtgtgt gccgagctgg
61 accgcgagga ggtggatcac tacagcttcg gggtggaggc ggtggaccac ggctggcccc
121 ccatgagctc ctccaccagc gtgtccatca cggtgctgga cgtgaatgac aacgacccgg
181 tgttcacgca gcccacctac gagcttcgtc tgaatgagga tgcggccgtg gggagcagcg
241 tgctgaccct gcaggcccgc gaccgtgacg ccaacagtgt gattacctac cagctcacag
301 gcggcaacac ccggaaccgc tttgcactca gcagccagag agggggcggc ctcatcaccc
361 tggcgctacc tctggactac aagcaggagc agcagtacgt gctggcggtg acagcatccg
421 acggcacacg gtcgcacact gcgcatgtcc taatcaacgt cactgatgcc aacacccaca
481 ggcctgtctt tcagagctcc cattacacag tgagtgtcag tgaggacagg cctgtgggca
541 cctccattgc taccctcagt gccaacgatg aggacacagg agagaatgcc cgcatcacct
601 acgtgattca ggaccccgtg ccgcagttcc gcattgaccc cgacagtggc accatgtaca
661 ccatgatgga gctggactat gagaaccagg tcgcctacac gctgaccatc atggcccagg
721 acaacggcat cccgcagaaa tcagacacca ccaccctaga gatcctcatc ctcgatgcca
781 atgacaatgc accccagttc ctgtgggatt tctaccaggg ttccatcttt gaggatgctc
841 caccctcgac cagcatcctc caggtctctg ccacggaccg ggactcaggt cccaatgggc
901 gtctgctgta caccttccag ggtggggacg acggcgatgg ggacttctac atcgagccca
961 cgtccggtgt gattcgcacc cagcgccggc tggaccggga gaatgtggcc gtgtacaacc
1021 tttgggctct ggctgtggat cggggcagtc ccactcccct tagcgcctcg gtagaaatcc
1081 aggtgaccat cttggacatt aatgacaatg cccccatgtt tgagaaggac gaactggagc
1141 tgtttgttga ggagaacaac ccagtggggt cggtggtggc aaagattcgt gctaacgacc
1201 ctgatgaagg ccctaatgcc cagatcatgt atcagattgt ggaaggggac atgcggcatt
1261 tcttccagct ggacctgctc aacggggacc tgcgtgccat ggtggagctg gactttgagg
1321 tccggcggga gtatgtgctg gtggtgcagg ccacgtcggc tccgctggtg agccgagcca
1381 cggtgcacat ccttctcgtg gaccagaatg acaacccgcc tgtgctgccc gacttccaga
1441 tcctcttcaa caactatgtc accaacaagt ccaacagttt ccccaccggc gtgatcggcc
1501 gcatcccggc ccatgacccc gacgtgtcag acagcctcaa ctacaccttc gtgcagggca
1561 acgagctgcg cctgttgctg ctggaccccg ccacgggcga actgcagctc agccgcgacc
1621 tggacaacaa ccggccgctg gaggcgctca tggaggtgtc tgtgtctgat ggcatccaca
1681 gcgtcacggc cttctgcacc ctgcgtgtca ccatcatcac ggacgacatg ctgaccaaca
1741 gcatcactgt ccgcctggag aacatgtccc aggagaagtt cctgtccccg ctgctggccc
1801 tcttcgtgga gggggtggcc gccgtgctgt ccaccaccaa ggacgacgtc ttcgtcttca
1861 acgtccagaa cgacaccgac gtcagctcca acatcctgaa cgtgaccttc tcggcgctgc
1921 tgcctggcgg cgtccgcggc cagttcttcc cgtcggagga cctgcaggag cagatctacc
1981 tgaatcggac gctgctgacc accatctcca cgcagcgcgt gctgcccttc gacgacaaca
2041 tctgcctgcg cgagccctgc gagaactaca tgaagtgcgt gtccgttctg cgattcgaca
2101 gctccgcgcc cttcctcagc tccaccaccg tgctcttccg gcccatccac cccatcaacg
2161 gcctgcgctg ccgctgcccg cccggcttca ccggcgacta ctgcgagacg gagatcgacc
2221 tctgctactc cgacccgtgc ggcgccaacg gccgctgccg cagccgcgag ggcggctaca
2281 cctgcgagtg cttcgaggac ttcactgaaa tttcgtgact catcctcccg cctctgaaga
2341 tgctctttcc ttgatacctc ctgactcatc accaagatga attactccaa atgtagccaa
2401 cggtggtttt taaaaataaa gagccacccc gagagtggta cagaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaa
//