LOCUS X03205 1869 bp DNA linear HUM 16-DEC-1994
DEFINITION Human 18S ribosomal RNA.
ACCESSION X03205
VERSION X03205.1
KEYWORDS 18S ribosomal RNA; ribosomal RNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1869)
AUTHORS McCallum F.S., Maden B.E.
TITLE Human 18 S ribosomal RNA sequence inferred from DNA sequence.
Variations in 18 S sequences and secondary modification patterns
between vertebrates
JOURNAL Biochem. J. 232(3), 725-733(1985).
PUBMED 4091818
COMMENT Data kindly reviewed (01-AUG-1986) by Maden B.E.
FEATURES Location/Qualifiers
source 1..1869
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
rRNA 1..1869
/note="18S rRNA"
modified_base 27..27
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 99..99
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 116..116
/mod_base=um
/note="2'-O-methyluridine"
modified_base 121..121
/mod_base=um
/note="2'-O-methyluridine"
modified_base 159..159
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 166..166
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 172..172
/mod_base=um
/note="2'-O-methyluridine"
modified_base 174..174
/mod_base=OTHER
/note="2'-O-cytidine"
modified_base 428..428
/mod_base=um
/note="2'-O-methyluridine"
modified_base 436..436
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 462..462
/mod_base=cm
/note="2'-O-methylcytidine"
modified_base 468..468
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 484..484
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 509..509
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 512..512
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 517..517
/mod_base=cm
/note="2'-O-methylcytidine"
modified_base 576..576
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 590..590
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 601..601
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 627..627
/mod_base=um
/note="2'-O-methyluridine"
modified_base 644..644
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 668..668
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 683..683
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 797..797
/mod_base=cm
/note="2'-O-methylcytidine"
modified_base 799..799
/mod_base=um
/note="2'-O-methyluridine"
modified_base 867..867
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 1031..1031
/mod_base=OTHER
/note="2'-O--methyladenosine"
modified_base 1248..1248
/mod_base=OTHER
/note="3-(3-amino-3-carboxypropyl) -1-methylpseudouridine"
modified_base 1288..1288
/mod_base=um
/note="2'-O-methyluridine"
modified_base 1326..1326
/mod_base=um
/note="2'-O-methyluridine"
modified_base 1328..1328
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 1383..1383
/mod_base=OTHER
/note="2'-O-methyladenosine"
modified_base 1391..1391
/mod_base=cm
/note="2'-O-methylcytidine"
modified_base 1442..1442
/mod_base=um
/note="2'-O-methyluridine"
modified_base 1447..1447
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 1490..1490
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 1639..1639
/mod_base=m7g
/note="7-methylguanosine"
modified_base 1668..1668
/mod_base=um
/note="2'-O-methyluridine"
modified_base 1678..1678
/mod_base=m2a
/note="2-methyladenosine"
modified_base 1703..1703
/mod_base=cm
/note="2'-O-methylcytidine"
modified_base 1804..1804
/mod_base=um
/note="2'-O-methyluridine"
modified_base 1832..1832
/mod_base=m6a
/note="N6-methyladenosine"
modified_base 1850..1850
/mod_base=OTHER
/note="N6-dimethyladenosine"
BASE COUNT 419 a 500 c 549 g 401 t
ORIGIN
1 tacctggttg atcctgccag tagcatatgc ttgtctcaaa gattaagcca tgcatgtcta
61 agtacgcacg gccggtacag tgaaactgcg aatggctcat taaatcagtt atggttcctt
121 tggtcgctcg ctcctctccc acttggataa ctgtggtaat tctagagcta atacatgccg
181 acgggcgctg acccccttcg cgggggggat gcgtgcattt atcagatcaa aaccaacccg
241 gtcagcccct ctccggcccc ggccgggggg cgggcgccgg cggctttggt gactctagat
301 aacctcgggc cgatcgcacg ccccccgtgg cggcgacgac ccattcgaac gtctgcccta
361 tcaactttcg atggtagtcg ccgtgcctac catggtgacc acgggtgacg gggaatcagg
421 gttcgattcc ggagagggag cctgagaaac ggctaccaca tccaaggaag gcagcaggcg
481 cgcaaattac ccactcccga cccggggagg tagtgacgaa aaataacaat acaggactct
541 ttcgaggccc tgtaattgga atgagtccac tttaaatcct ttaacgagga tccattggag
601 ggcaagtctg gtgccagcag ccgcggtaat tccagctcca atagcgtata ttaaagttgc
661 tgcagttaaa aagctcgtag ttggatcttg ggagcgggcg ggcggtccgc cgcgaggcga
721 gccaccgccc gtccccgccc cttgcctctc ggcgccccct cgatgctctt agctgagtgt
781 cccgcggggc ccgaagcgtt tactttgaaa aaattagagt gttcaaagca ggcccgagcc
841 gcctggatac cgcagctagg aataatggaa taggaccgcg gttctatttt gttggttttc
901 ggaactgagg ccatgattaa gagggacggc cgggggcatt cgtattgcgc cgctagaggt
961 gaaattcttg gaccggcgca agacggacca gagcgaaagc atttgccaag aatgttttca
1021 ttaatcaaga acgaaagtcg gaggttcgaa gacgatcaga taccgtcgta gttccgacca
1081 taaacgatgc cgaccggcga tgcggcggcg ttattcccat gacccgccgg gcagcttccg
1141 ggaaaccaaa gtctttgggt tccgggggga gtatggttgc aaagctgaaa cttaaaggaa
1201 ttgacggaag ggcaccacca ggagtggagc ctgcggctta atttgactca acacgggaaa
1261 cctcacccgg cccggacacg gacaggattg acagattgat agctctttct cgattccgtg
1321 ggtggtggtg catggccgtt cttagttggt ggagcgattt gtctggttaa ttccgataac
1381 gaacgagact ctggcatgct aactagttac gcgacccccg agcggtcggc gtcccccaac
1441 ttcttagagg gacaagtggc gttcagccac ccgagattga gcaataacag gtctgtgatg
1501 cccttagatg tccggggctg cacgcgcgct acactgactg gctcagcgtg tgcctaccct
1561 acgccggcag gcgcgggtaa cccgttgaac cccattcgtg atggggatcg gggattgcaa
1621 ttattcccca tgaacgagga attcccagta agtgcgggtc ataagcttgc gttgattaag
1681 tccctgccct ttgtacacac cgcccgtcgc tactaccgat tggatggttt agtgaggccc
1741 tcggatcggc cccgccgggg tcggcccacg gccctggcgg agcgctgaga agacggtcga
1801 acttgactat ctagaggaag taaaagtcgt aacaaggttt ccgtaggtga acctgcggaa
1861 ggatcatta
//