LOCUS PQ317396 651 bp DNA linear VRT 05-JUN-2025
DEFINITION Oreichthys sp. w LD-2024 voucher KUFOS.2024.5.5 cytochrome c
oxidase subunit I (COX1) gene, partial cds; mitochondrial.
ACCESSION PQ317396
VERSION PQ317396.1
KEYWORDS .
SOURCE mitochondrion Oreichthys sp. w LD-2024
ORGANISM Oreichthys sp. w LD-2024
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Cyprinidae; Smiliogastrinae; Oreichthys.
REFERENCE 1 (bases 1 to 651)
AUTHORS Dann,L., Dahanukar,N. and Raghavan,R.
TITLE Oreichthys warjaintia, a new species of cyprinid fish from
Meghalaya, India (Cypriniformes: Cyprinidae)
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 651)
AUTHORS Dann,L., Dahanukar,N. and Raghavan,R.
TITLE Direct Submission
JOURNAL Submitted (12-SEP-2024) Fisheries Resource Management (FRM), Kerala
University of Fisheries and Ocean Studies (KUFOS), Panangad, Kochi,
Kerala 682506, India
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..651
/organism="Oreichthys sp. w LD-2024"
/organelle="mitochondrion"
/mol_type="genomic DNA"
/specimen_voucher="KUFOS.2024.5.5"
/db_xref="taxon:3344804"
/geo_loc_name="India: Meghalaya, Pyrngang stream
(Surma-Meghna basin), Pynthor near Lakroh village, West
Jaintia Hills District"
/lat_lon="25.16353 N 92.165319 E"
/collection_date="17-May-2024"
/collected_by="Lekiningroy Dann"
/identified_by="Lekiningroy Dann"
/PCR_primers="fwd_name: Fish F1, fwd_seq:
tcaaccaaccacaaagacattggcac, rev_name: Fish R1, rev_seq:
tagacttctgggtggccaaagaatca"
gene <1..>651
/gene="COX1"
CDS <1..>651
/gene="COX1"
/codon_start=1
/transl_table=2
/product="cytochrome c oxidase subunit I"
/protein_id="XGT67679.1"
/translation="GMMGTALSLLIRAELNQPGALLGDDQIYNVIVTAHAFVMIFFMV
MPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSAVEAGAGTGWTV
YPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPALSQYQTPLFVW
SVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEV"
BASE COUNT 175 a 164 c 103 g 209 t
ORIGIN
1 ggaataatag gaaccgccct aagtcttctt attcgagctg aattaaatca gcctggagca
61 cttttaggcg acgatcaaat ttataatgta atcgttaccg cccatgcttt cgtaataatt
121 ttctttatag ttatacccat tcttattgga gggttcggca attgacttgt ccccctaata
181 attggtgccc ccgacatagc ctttccacga ataaataata taagcttttg actattaccc
241 ccatcatttt tacttttact agcctcctct gctgttgaag ctggagccgg aacagggtga
301 acagtatatc cccctttagc cggaaattta gcccacgcag gcgcatcagt agacctaaca
361 attttttcgc tccacttagc aggtgtctca tcaattttag gggcaattaa ttttattacc
421 acaacaatta atataaaacc tccagccctt tctcaatatc aaaccccatt atttgtatga
481 tccgtacttg tgactgctgt acttcttctt ctatctctac cagttctagc tgctggaatt
541 acaatacttt taacagaccg aaatctcaat actacattct ttgatcctgc cggaggagga
601 gaccccattc tctaccaaca cttattctga ttctttggcc acccagaagt c
//