LOCUS LJ646617 1206 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68448.graph_c0_seq8.
ACCESSION LJ646617
VERSION LJ646617.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1206)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1206
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68448.graph_c0_seq8"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 424 a 212 c 231 g 339 t
ORIGIN
1 gacactaatc gaggcgtcgc taatgtaaag cccgcgtgcc ccatattgtg atgcaccgac
61 gagaacgcga cgggacaaag gacgctttcg tacgcaagca gagggacgcc atgttcattt
121 gtcaacggac atcgaggtgt tcccgtacgg gatgaacgag ccgagaactg tccccgaaca
181 ggagtcggag aatcgagccg cggtagcgga ggatctctcg tgcgtctcgt cccgtcctcg
241 tcccgacatg aagagcaccg tcgccgagtc gcggaaacgc aaacgcgagg aatacgagat
301 gcagctgttc ggcttccatt cccgagccgt gtacgcgact ctgaagagta ttgtaatgga
361 aagcatacag tctaaaagca aaaaattatg tcaaactttg aaaaatcata agtcatattc
421 tgaaaatcta gacaccctaa aaatgaacga agagcaactt gtaaaagcat actatgcagc
481 ttccttacct catttgagga acataaagat gaggataaac ttcaaagcat acaatataca
541 aaagaagagt ttgtaaatat gagcaaagaa ctggaggaat ttcaacaaag agcaaaacga
601 gcaactgtgt tgaatgcagc attgaaggag gaattacagc tcacagagca atatttgatc
661 catgcggaca ataatgatag actgactcaa ataattgaaa atggcgttgc cgaaatcaaa
721 atggcacacc cgaatgtcag gaacaaaatt catcaattga tcaagaatta taaacagttc
781 agctcgtatt taaatgacaa aacgtctata tcgcaaaaat tgctctataa tatgatcgat
841 gatctcaaat gtatagatta tgacatgaat attttatgat tatagaaaat aaattatttt
901 cgtgatgtgt ttgctttatt gctaatattg ttgttttcct aaaattatat aaatatgtaa
961 ataaatgcat tctatgaatg ttatatatca tgtattgtat acaatttaca attttttatt
1021 atacaattta taaatatata tatatatttg tatctttaat ataaatgtca atgattttat
1081 tttccatgat atcttcaaat gcaaagaggc tataatattc ggcgcgataa ataattctct
1141 ccttttacca atatatatgt gataaatttt agtaatagct atgttaattc atgtaaattg
1201 taaata
//