LOCUS LJ646615 1084 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c68448.graph_c0_seq6.
ACCESSION LJ646615
VERSION LJ646615.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1084)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1084
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c68448.graph_c0_seq6"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 346 a 215 c 257 g 266 t
ORIGIN
1 gacactaatc gaggcgtcgc taatgtaaag cccgcgtgcc ccatattgtg atgcaccgac
61 gagaacgcga cgggacaaag gacgctttcg tacgcaagca gagggacgcc atgttcattt
121 gtcaacggac atcgaggtgt tcccgtacgg gatgaacgag ccgagaactg tccccgaaca
181 ggagtcggag aatcgagccg cggtagcgga ggatctctcg tgcgtctcgt ccagtcctcg
241 tcctcgtccc gacatgaaga gcaccgtcgc cgagtcgcgg aaacgcaaac gcgaggaata
301 cgagatgcag ctgttcggct tccattcccg agccgtttac gcgactctca agagtattgt
361 aatggaaggg atacaatcta ggagcagaaa attatgtgaa acgttggaaa aagtacataa
421 gacagacgct gctaacttgg ccatgctaaa ggcgaatgaa gagaggcttg taaaagctta
481 caacacagct gctgcgcctt atttaaaaaa cttagagaat attgtgaaca aattcattgc
541 tgtgcccaac aatgttctgg cggatgagga taaaattcaa gagatacaat acactgaagc
601 agaatttgag aatatacgcg ggaaactaga ggaattacag caaagagcaa gacgagcggc
661 tgtgttgaac gcgtcattga atgaggaatt acagctcata gaacaatttt cgatctgtgc
721 ggacaatacc gataggctga gtcacataat tgagagcagc attaaatgcc cggatgtcag
781 tgacaaaatt catcaattgg tcgagtatta taaacgattc agcgcgttcc ttgacgatgg
841 ggtacctgtg tccgaaaagt cgatctataa tgcgatcgat gatctcaaat gtatagactg
901 caatatggat gccttataat agcatagaaa aaaaaatatt ttagcaactc tttgaatgct
961 tagttgttaa tactactgcc tttttgagat tattatgtaa atatgtaaat aaaatcgttc
1021 tgcagatatt ttttatacgc atgtaatata aattctatat aacttacaat tttaataaat
1081 aagc
//