LOCUS LJ623400 545 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c66531.graph_c1_seq1.
ACCESSION LJ623400
VERSION LJ623400.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 545)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..545
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c66531.graph_c1_seq1"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 205 a 81 c 92 g 167 t
ORIGIN
1 aagcagtggt atcaacgcaa aactcaatta cggacgcaaa atcacaaaac cgcatactga
61 agttgctcta gcggtaagat aattggagtg atttttgatt gctttgggct acagtattta
121 cacgatctca tttgtatatt taaataatat tagcacgcgc gcgcgcacgc atacacacac
181 acacacaaac acaattaaca taaggtgttt tccacacaaa tcgacataag cattgtgcta
241 ctttttttgg ttgttcaata ggtaacaaag atagaagaat gcttgtgtca acttgtgtta
301 ttaaatggaa agcatttata gtatttaatg attcgcatac aatatcttat gcatgcgaaa
361 tagttttata tgatagtatt tatttttgaa gagaggaaaa aagtaaagag aatttataac
421 gctatcttat tctgatggtt tatataatat atacaacgat ttcgttgtgc gcgaaattac
481 aagtgataaa ttcatgataa aagctaagaa attaaacgtt tctcacgtaa aaaaaaaaaa
541 aaaaa
//