LOCUS LJ621999 1539 bp mRNA linear TSA 19-MAR-2016
DEFINITION TSA: Solenopsis invicta mRNA, contig: c67045.graph_c0_seq5.
ACCESSION LJ621999
VERSION LJ621999.1
DBLINK BioProject:PRJDB4088
Sequence Read Archive:DRR042171, DRR042172, DRR042173, DRR042174,
DRR042175, DRR042176
BioSample:SAMD00035829, SAMD00035830, SAMD00035831, SAMD00035832,
SAMD00035833, SAMD00035834
KEYWORDS TSA; Transcriptome Shotgun Assembly.
SOURCE Solenopsis invicta (red fire ant)
ORGANISM Solenopsis invicta
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis.
REFERENCE 1 (bases 1 to 1539)
AUTHORS Mikheyev,A.S., Morandin,C. and Grau,M.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2015)
Contact:Alexander Mikheyev
Okinawa Institute of Science and Technology, Ecology and
Evolution; 1919-1, Tancha, Okinawa 904-0495, Japan
REFERENCE 2
AUTHORS Morandin,C., Tin,M.M.Y., Abril,S., Gomez,C., Pontieri,L.,
Schiott,M., Sundstrom,L., Tsuji,K., Pedersen,J.S., Helantera,H.
and Mikheyev,A.S.
TITLE Comparative transcriptomics reveals the conserved building blocks
involved in parallel evolution of diverse phenotypic traits in ants
JOURNAL Genome Biol. 17, 43 (2016)
COMMENT ##Assembly-Data-START##
Assembly Method :: Trinity v. r20130225
Sequencing Technology :: Illumina HiSeq 2000
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1539
/db_xref="taxon:13686"
/dev_stage="adult"
/mol_type="mRNA"
/note="contig: c67045.graph_c0_seq5"
/note="polygynous"
/organism="Solenopsis invicta"
/tissue_type="whole body"
BASE COUNT 548 a 214 c 256 g 521 t
ORIGIN
1 caggaaagca gtggtatcgc aatacgcagg aaacttatcg tgttatctct cggattcaag
61 atgaatccag gatactaagg ctgtcacgta gactagcttt atcactggaa cgcctcagcc
121 agaggcaatt ttgtagcgcg taatttagct ttttaatgat tgagattaca ttactgaaag
181 tataagtaac ataacgaaaa aagcatgtat gaatgtgtaa tttttatgtt acgacgtgaa
241 tgtcgatcgg tcgagaaaaa aagaaaatat gtttgcgatt ggtctattat cgcgtatgat
301 gaaaatgctt gatattggaa agcttaagat ttcgctgatt cgtcagcacg ctaatagaac
361 tttctatact tatcgtcaat gtaaagatgc tcagggcaga gtgacataat tgacggatac
421 ttcttacacg cgcgtaaaat gaaaaatacg tccgaggctt ttttggctac tcatctaatg
481 cttaaacaat actaagaact ttatcgagca aaaattacat ttaatgctat tgctttatcg
541 agcggttgtt aatttataaa cataatcata ttgaaataaa aataatattg tacgcagtgc
601 cgcattaact tgtttgggtt aaaatatttt aagctttttg taagatgtaa tctgggtaag
661 atttttttca gaaattatat tagattagaa attcttatat ataaaattgt tattatttat
721 attttacaac cctaattttt tatcacaatc atcaaaattt tatacatttc atgattttaa
781 aagttgattt tccatgagtt tgcttaaaaa aaatcattta tatctaattt cttaggtata
841 caatttttgt taatgttttc taatttctta aaaatttttt ttattactca actaaaaaaa
901 ttttattgta caatttacta tcttgaatta taagcccatt caaatactat ttattaatac
961 gacactgatt gtacaatact tgtttgtata aattgtataa aataaataag aaatatttta
1021 attttgtttc gaaaaataag agaaatacat tgtaaattat attattttat ttttggtctg
1081 ataatgaaat taccgatttc aatatcgcgt tgtgatttct aatcaagcct catgcttgaa
1141 aaatgattgt atgacatttg tatcgacacg acgaaaaatt tgactgatag aacctacaca
1201 aagaaactcg cccaattata gtaattccaa gaggcacgca attatttaag caacacgatt
1261 aaacatgagt aagaggcgac ccgcacgtga aaattcgccc ctttaatccc tgtataatcc
1321 gtggcctatg aatattaaga aaacatgcga gtaatccttg aaaaatttgt acatacttta
1381 taatgatgta gggagcaatt tataatatat atagataggt atgtagatag aggcaaatag
1441 ctaaggtaat tatctgaatc gatagacagt tatatttagg cgaataagta gacaaaggaa
1501 aataagcgaa ccgctcacaa ggaacgatga ggggggagg
//